Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC1.93□□□□□ -2.1
COL4A5P29400 AL049838.1-201ENST00000563647 981 ntBASIC1.93□□□□□ -2.1
COL4A5P29400 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC1.93□□□□□ -2.1
COL4A5P29400 AC098848.2-201ENST00000588023 330 ntBASIC1.93□□□□□ -2.1
COL4A5P29400 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC1.93□□□□□ -2.1
COL4A5P29400 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC1.93□□□□□ -2.1
COL4A5P29400 AL078603.1-201ENST00000603824 313 ntBASIC1.93□□□□□ -2.1
COL4A5P29400 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC1.93□□□□□ -2.1
COL4A5P29400 CR381572.1-201ENST00000625098 102 ntBASIC1.93□□□□□ -2.1
COL4A5P29400 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
COL4A5P29400 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
COL4A5P29400 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
COL4A5P29400 SNORA7.1-201ENST00000363750 139 ntBASIC1.93□□□□□ -2.1
COL4A5P29400 RNU1-101P-201ENST00000391171 127 ntBASIC1.93□□□□□ -2.1
COL4A5P29400 AL035405.1-201ENST00000400795 710 ntBASIC1.93□□□□□ -2.1
COL4A5P29400 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.93□□□□□ -2.1
COL4A5P29400 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC1.93□□□□□ -2.1
COL4A5P29400 SETP8-201ENST00000435341 628 ntBASIC1.93□□□□□ -2.1
COL4A5P29400 AC244505.5-201ENST00000443639 207 ntBASIC1.93□□□□□ -2.1
COL4A5P29400 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC1.93□□□□□ -2.1
COL4A5P29400 AC089999.1-201ENST00000460336 374 ntBASIC1.93□□□□□ -2.1
COL4A5P29400 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.93□□□□□ -2.1
COL4A5P29400 RNF138P1-201ENST00000502765 546 ntBASIC1.93□□□□□ -2.1
COL4A5P29400 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC1.93□□□□□ -2.1
COL4A5P29400 AL161670.1-201ENST00000554348 137 ntBASIC1.93□□□□□ -2.1
COL4A5P29400 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC1.93□□□□□ -2.1
COL4A5P29400 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC1.93□□□□□ -2.1
COL4A5P29400 BNIP3P7-201ENST00000605641 516 ntBASIC1.93□□□□□ -2.1
COL4A5P29400 MIR6515-201ENST00000619843 57 ntBASIC1.93□□□□□ -2.1
COL4A5P29400 AC024595.1-201ENST00000623088 387 ntBASIC1.93□□□□□ -2.1
COL4A5P29400 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC1.93□□□□□ -2.1
COL4A5P29400 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.93□□□□□ -2.1
COL4A5P29400 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
COL4A5P29400 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC1.92□□□□□ -2.1
COL4A5P29400 MIR96-201ENST00000362288 78 ntBASIC1.92□□□□□ -2.1
COL4A5P29400 SFR1P1-201ENST00000403720 688 ntBASIC1.92□□□□□ -2.1
COL4A5P29400 RPL23AP47-201ENST00000408017 460 ntBASIC1.92□□□□□ -2.1
COL4A5P29400 AC092745.2-202ENST00000411880 369 ntBASIC1.92□□□□□ -2.1
COL4A5P29400 BNIP3P2-201ENST00000441221 577 ntBASIC1.92□□□□□ -2.1
COL4A5P29400 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC1.92□□□□□ -2.1
COL4A5P29400 ARPC3P2-201ENST00000457786 533 ntBASIC1.92□□□□□ -2.1
COL4A5P29400 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.92□□□□□ -2.1
COL4A5P29400 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC1.92□□□□□ -2.1
COL4A5P29400 MTND4LP22-201ENST00000508209 276 ntBASIC1.92□□□□□ -2.1
COL4A5P29400 RNU6-760P-201ENST00000516078 97 ntBASIC1.92□□□□□ -2.1
COL4A5P29400 RNU6-1073P-201ENST00000517182 106 ntBASIC1.92□□□□□ -2.1
COL4A5P29400 AF279873.1-201ENST00000523393 313 ntBASIC1.92□□□□□ -2.1
COL4A5P29400 MTCYBP41-201ENST00000528913 1123 ntBASIC1.92□□□□□ -2.1
COL4A5P29400 AC007375.1-201ENST00000554513 578 ntBASIC1.92□□□□□ -2.1
COL4A5P29400 AC107954.1-201ENST00000565906 727 ntBASIC1.92□□□□□ -2.1
COL4A5P29400 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC1.92□□□□□ -2.1
COL4A5P29400 YWHAQP7-201ENST00000603536 658 ntBASIC1.92□□□□□ -2.1
COL4A5P29400 AC012150.2-201ENST00000621300 544 ntBASIC1.92□□□□□ -2.1
COL4A5P29400 AP001486.2-201ENST00000561652 5113 ntBASIC1.91□□□□□ -2.1
COL4A5P29400 AC006026.1-201ENST00000444025 1803 ntBASIC1.91□□□□□ -2.1
COL4A5P29400 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
COL4A5P29400 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
COL4A5P29400 DEFB109C-201ENST00000382575 264 ntBASIC1.91□□□□□ -2.1
COL4A5P29400 DEFB109B-201ENST00000382656 264 ntBASIC1.91□□□□□ -2.1
COL4A5P29400 BX510359.4-201ENST00000423750 193 ntBASIC1.91□□□□□ -2.1
COL4A5P29400 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC1.91□□□□□ -2.1
COL4A5P29400 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC1.91□□□□□ -2.1
COL4A5P29400 PTGES3P5-201ENST00000455109 434 ntBASIC1.91□□□□□ -2.1
COL4A5P29400 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
COL4A5P29400 MTCO3P35-201ENST00000485582 781 ntBASIC1.91□□□□□ -2.1
COL4A5P29400 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC1.91□□□□□ -2.1
COL4A5P29400 AC084033.1-201ENST00000550830 633 ntBASIC1.91□□□□□ -2.1
COL4A5P29400 AL163153.1-201ENST00000554223 283 ntBASIC1.91□□□□□ -2.1
COL4A5P29400 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC1.91□□□□□ -2.1
COL4A5P29400 AC034268.2-201ENST00000571784 482 ntBASIC1.91□□□□□ -2.1
COL4A5P29400 AC079610.2-201ENST00000604818 690 ntBASIC1.91□□□□□ -2.1
COL4A5P29400 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.91□□□□□ -2.1
COL4A5P29400 RNA5SP37-201ENST00000365420 130 ntBASIC1.9□□□□□ -2.1
COL4A5P29400 RNU6-152P-201ENST00000384037 107 ntBASIC1.9□□□□□ -2.1
COL4A5P29400 SNORA51.12-201ENST00000384448 134 ntBASIC1.9□□□□□ -2.1
COL4A5P29400 RNU6-342P-201ENST00000384521 104 ntBASIC1.9□□□□□ -2.1
COL4A5P29400 RNU6-837P-201ENST00000391056 108 ntBASIC1.9□□□□□ -2.1
COL4A5P29400 PRRC2CP1-201ENST00000404428 159 ntBASIC1.9□□□□□ -2.1
COL4A5P29400 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC1.9□□□□□ -2.1
COL4A5P29400 DPPA2P1-201ENST00000428060 556 ntBASIC1.9□□□□□ -2.1
COL4A5P29400 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC1.9□□□□□ -2.1
COL4A5P29400 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC1.9□□□□□ -2.1
COL4A5P29400 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC1.9□□□□□ -2.1
COL4A5P29400 SSXP4-201ENST00000451349 245 ntBASIC1.9□□□□□ -2.1
COL4A5P29400 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC1.9□□□□□ -2.1
COL4A5P29400 HMGB1P38-201ENST00000490557 577 ntBASIC1.9□□□□□ -2.1
COL4A5P29400 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC1.9□□□□□ -2.1
COL4A5P29400 ATP5EP1-201ENST00000510257 156 ntBASIC1.9□□□□□ -2.1
COL4A5P29400 AC093770.1-201ENST00000511559 571 ntBASIC1.9□□□□□ -2.1
COL4A5P29400 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC1.9□□□□□ -2.1
COL4A5P29400 HMGB1P46-201ENST00000520062 610 ntBASIC1.9□□□□□ -2.1
COL4A5P29400 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC1.9□□□□□ -2.1
COL4A5P29400 AC008676.3-201ENST00000521237 435 ntBASIC1.9□□□□□ -2.1
COL4A5P29400 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.9□□□□□ -2.1
COL4A5P29400 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC1.9□□□□□ -2.1
COL4A5P29400 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.9□□□□□ -2.1
COL4A5P29400 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC1.9□□□□□ -2.1
COL4A5P29400 AC025048.6-202ENST00000627667 438 ntBASIC1.9□□□□□ -2.1
COL4A5P29400 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC1.9□□□□□ -2.11
COL4A5P29400 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms