Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
COL6A2P12110 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
COL6A2P12110 AC011266.1-201ENST00000624119 3569 ntBASIC4.49□□□□□ -1.69
COL6A2P12110 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.49□□□□□ -1.69
COL6A2P12110 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.49□□□□□ -1.69
COL6A2P12110 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
COL6A2P12110 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
COL6A2P12110 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.49□□□□□ -1.69
COL6A2P12110 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.49□□□□□ -1.69
COL6A2P12110 AC006971.1-201ENST00000407916 4486 ntBASIC4.49□□□□□ -1.69
COL6A2P12110 RNA5SP52-201ENST00000362448 134 ntBASIC4.49□□□□□ -1.69
COL6A2P12110 RNA5SP307-201ENST00000362863 116 ntBASIC4.49□□□□□ -1.69
COL6A2P12110 RN7SKP44-201ENST00000363602 316 ntBASIC4.49□□□□□ -1.69
COL6A2P12110 SNORD116-29-201ENST00000384516 83 ntBASIC4.49□□□□□ -1.69
COL6A2P12110 RNU6-1127P-201ENST00000384580 107 ntBASIC4.49□□□□□ -1.69
COL6A2P12110 MIR550A3-201ENST00000390735 95 ntBASIC4.49□□□□□ -1.69
COL6A2P12110 AC110754.1-201ENST00000399740 601 ntBASIC4.49□□□□□ -1.69
COL6A2P12110 RNA5SP239-201ENST00000410218 129 ntBASIC4.49□□□□□ -1.69
COL6A2P12110 RNU6-712P-201ENST00000410558 100 ntBASIC4.49□□□□□ -1.69
COL6A2P12110 RN7SKP167-201ENST00000411047 285 ntBASIC4.49□□□□□ -1.69
COL6A2P12110 RNA5SP39-201ENST00000411245 120 ntBASIC4.49□□□□□ -1.69
COL6A2P12110 RN7SKP100-201ENST00000411258 284 ntBASIC4.49□□□□□ -1.69
COL6A2P12110 AC074085.1-201ENST00000413598 418 ntBASIC4.49□□□□□ -1.69
COL6A2P12110 RPL7P10-201ENST00000417407 739 ntBASIC4.49□□□□□ -1.69
COL6A2P12110 AC099677.1-201ENST00000420575 175 ntBASIC4.49□□□□□ -1.69
COL6A2P12110 AC004866.2-201ENST00000438285 481 ntBASIC4.49□□□□□ -1.69
COL6A2P12110 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC4.49□□□□□ -1.69
COL6A2P12110 HMGB3P11-201ENST00000440127 604 ntBASIC4.49□□□□□ -1.69
COL6A2P12110 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.49□□□□□ -1.69
COL6A2P12110 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.49□□□□□ -1.69
COL6A2P12110 NIPA2P5-201ENST00000452282 464 ntBASIC4.49□□□□□ -1.69
COL6A2P12110 AC091685.2-201ENST00000454924 864 ntBASIC4.49□□□□□ -1.69
COL6A2P12110 AC133473.1-201ENST00000455173 299 ntBASIC4.49□□□□□ -1.69
COL6A2P12110 RNU7-152P-201ENST00000458982 64 ntBASIC4.49□□□□□ -1.69
COL6A2P12110 SCARNA18-201ENST00000459004 134 ntBASIC4.49□□□□□ -1.69
COL6A2P12110 RPL21P93-201ENST00000480465 489 ntBASIC4.49□□□□□ -1.69
COL6A2P12110 MEPE-206ENST00000511670 550 ntTSL 4 BASIC4.49□□□□□ -1.69
COL6A2P12110 RN7SKP276-201ENST00000516242 268 ntBASIC4.49□□□□□ -1.69
COL6A2P12110 RNU6-1045P-201ENST00000516321 107 ntBASIC4.49□□□□□ -1.69
COL6A2P12110 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.49□□□□□ -1.69
COL6A2P12110 AC018630.1-201ENST00000541376 925 ntBASIC4.49□□□□□ -1.69
COL6A2P12110 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC4.49□□□□□ -1.69
COL6A2P12110 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.49□□□□□ -1.69
COL6A2P12110 AF038458.1-201ENST00000588406 262 ntBASIC4.49□□□□□ -1.69
COL6A2P12110 LLPHP1-201ENST00000603571 367 ntBASIC4.49□□□□□ -1.69
COL6A2P12110 APOOP1-201ENST00000604695 592 ntBASIC4.49□□□□□ -1.69
COL6A2P12110 IGHV3-29-201ENST00000604817 344 ntBASIC4.49□□□□□ -1.69
COL6A2P12110 AC245389.1-201ENST00000605141 529 ntBASIC4.49□□□□□ -1.69
COL6A2P12110 AL138721.1-201ENST00000616756 179 ntBASIC4.49□□□□□ -1.69
COL6A2P12110 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.49□□□□□ -1.69
COL6A2P12110 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.49□□□□□ -1.69
COL6A2P12110 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
COL6A2P12110 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.49□□□□□ -1.69
COL6A2P12110 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
COL6A2P12110 AC012618.3-205ENST00000637896 1496 ntBASIC4.49□□□□□ -1.69
COL6A2P12110 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
COL6A2P12110 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
COL6A2P12110 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
COL6A2P12110 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.48□□□□□ -1.69
COL6A2P12110 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
COL6A2P12110 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC4.48□□□□□ -1.69
COL6A2P12110 SNORA23-201ENST00000365128 182 ntBASIC4.48□□□□□ -1.69
COL6A2P12110 RNU6-356P-201ENST00000384140 107 ntBASIC4.48□□□□□ -1.69
COL6A2P12110 MIR548P-201ENST00000408336 84 ntBASIC4.48□□□□□ -1.69
COL6A2P12110 RN7SKP158-201ENST00000410453 326 ntBASIC4.48□□□□□ -1.69
COL6A2P12110 SNORA74C-2-201ENST00000411179 201 ntBASIC4.48□□□□□ -1.69
COL6A2P12110 COX6B1P1-201ENST00000415962 213 ntBASIC4.48□□□□□ -1.69
COL6A2P12110 PPP1R11P2-201ENST00000423543 382 ntBASIC4.48□□□□□ -1.69
COL6A2P12110 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.48□□□□□ -1.69
COL6A2P12110 CKS1BP5-201ENST00000434172 273 ntBASIC4.48□□□□□ -1.69
COL6A2P12110 AC005154.2-201ENST00000438110 379 ntBASIC4.48□□□□□ -1.69
COL6A2P12110 BRK1P2-201ENST00000442875 223 ntBASIC4.48□□□□□ -1.69
COL6A2P12110 AC011753.3-201ENST00000443436 406 ntBASIC4.48□□□□□ -1.69
COL6A2P12110 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.48□□□□□ -1.69
COL6A2P12110 RPS15AP27-201ENST00000449183 343 ntBASIC4.48□□□□□ -1.69
COL6A2P12110 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.48□□□□□ -1.69
COL6A2P12110 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC4.48□□□□□ -1.69
COL6A2P12110 VN1R17P-201ENST00000472048 1090 ntBASIC4.48□□□□□ -1.69
COL6A2P12110 HMGB3P15-201ENST00000507326 574 ntBASIC4.48□□□□□ -1.69
COL6A2P12110 RBBP4P6-201ENST00000508098 202 ntBASIC4.48□□□□□ -1.69
COL6A2P12110 RNU6-189P-201ENST00000516120 101 ntBASIC4.48□□□□□ -1.69
COL6A2P12110 RNU6-566P-201ENST00000516790 107 ntBASIC4.48□□□□□ -1.69
COL6A2P12110 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.48□□□□□ -1.69
COL6A2P12110 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC4.48□□□□□ -1.69
COL6A2P12110 AP001330.4-201ENST00000604350 154 ntBASIC4.48□□□□□ -1.69
COL6A2P12110 AP001836.1-201ENST00000604675 523 ntBASIC4.48□□□□□ -1.69
COL6A2P12110 AC010680.4-201ENST00000605334 543 ntBASIC4.48□□□□□ -1.69
COL6A2P12110 AL049539.1-201ENST00000611964 459 ntBASIC4.48□□□□□ -1.69
COL6A2P12110 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.48□□□□□ -1.69
COL6A2P12110 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.48□□□□□ -1.69
COL6A2P12110 CPHL1P-201ENST00000461341 3407 ntBASIC4.48□□□□□ -1.69
COL6A2P12110 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
COL6A2P12110 AC139769.1-204ENST00000472297 1931 ntBASIC4.48□□□□□ -1.69
COL6A2P12110 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
COL6A2P12110 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
COL6A2P12110 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.47□□□□□ -1.69
COL6A2P12110 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
COL6A2P12110 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.47□□□□□ -1.69
COL6A2P12110 MAPK10-253ENST00000641010 4072 ntBASIC4.47□□□□□ -1.69
COL6A2P12110 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms