Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 DDX10P1-201ENST00000448545 1933 ntBASIC2.69□□□□□ -1.98
PCF11O94913 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
PCF11O94913 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
PCF11O94913 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC2.68□□□□□ -1.98
PCF11O94913 AL645568.3-201ENST00000433683 316 ntBASIC2.68□□□□□ -1.98
PCF11O94913 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC2.68□□□□□ -1.98
PCF11O94913 AC244505.5-201ENST00000443639 207 ntBASIC2.68□□□□□ -1.98
PCF11O94913 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.68□□□□□ -1.98
PCF11O94913 AC104689.1-201ENST00000473356 768 ntBASIC2.68□□□□□ -1.98
PCF11O94913 RNU1-40P-201ENST00000516816 164 ntBASIC2.68□□□□□ -1.98
PCF11O94913 RNU1-97P-201ENST00000516872 164 ntBASIC2.68□□□□□ -1.98
PCF11O94913 AC008562.1-201ENST00000521763 330 ntBASIC2.68□□□□□ -1.98
PCF11O94913 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC2.68□□□□□ -1.98
PCF11O94913 SNORD84-203ENST00000584275 78 ntBASIC2.68□□□□□ -1.98
PCF11O94913 OR4G1P-201ENST00000588632 938 ntBASIC2.68□□□□□ -1.98
PCF11O94913 AC136443.5-201ENST00000603741 370 ntBASIC2.68□□□□□ -1.98
PCF11O94913 RPL23AP88-201ENST00000605759 454 ntBASIC2.68□□□□□ -1.98
PCF11O94913 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC2.68□□□□□ -1.98
PCF11O94913 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
PCF11O94913 MTND4P1-201ENST00000457501 1466 ntBASIC2.67□□□□□ -1.98
PCF11O94913 METTL21EP-201ENST00000298105 713 ntBASIC2.67□□□□□ -1.98
PCF11O94913 RNU6-53P-201ENST00000365367 106 ntBASIC2.67□□□□□ -1.98
PCF11O94913 SSXP9-201ENST00000417503 292 ntBASIC2.67□□□□□ -1.98
PCF11O94913 MTCO3P4-201ENST00000419236 787 ntBASIC2.67□□□□□ -1.98
PCF11O94913 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.67□□□□□ -1.98
PCF11O94913 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC2.67□□□□□ -1.98
PCF11O94913 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.67□□□□□ -1.98
PCF11O94913 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.67□□□□□ -1.98
PCF11O94913 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC2.67□□□□□ -1.98
PCF11O94913 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC2.67□□□□□ -1.98
PCF11O94913 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC2.67□□□□□ -1.98
PCF11O94913 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC2.67□□□□□ -1.98
PCF11O94913 AC006963.1-201ENST00000624003 1052 ntBASIC2.67□□□□□ -1.98
PCF11O94913 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.67□□□□□ -1.98
PCF11O94913 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
PCF11O94913 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.66□□□□□ -1.98
PCF11O94913 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
PCF11O94913 RNA5SP27-201ENST00000363839 119 ntBASIC2.66□□□□□ -1.98
PCF11O94913 MIR598-201ENST00000384868 97 ntBASIC2.66□□□□□ -1.98
PCF11O94913 RN7SKP101-201ENST00000411376 320 ntBASIC2.66□□□□□ -1.98
PCF11O94913 TPMTP3-201ENST00000411928 735 ntBASIC2.66□□□□□ -1.98
PCF11O94913 AC109780.2-201ENST00000413467 845 ntBASIC2.66□□□□□ -1.98
PCF11O94913 BLOC1S2P1-201ENST00000428431 301 ntBASIC2.66□□□□□ -1.98
PCF11O94913 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC2.66□□□□□ -1.98
PCF11O94913 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
PCF11O94913 IGKV2D-36-201ENST00000518643 226 ntBASIC2.66□□□□□ -1.98
PCF11O94913 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC2.66□□□□□ -1.98
PCF11O94913 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC2.66□□□□□ -1.98
PCF11O94913 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.66□□□□□ -1.98
PCF11O94913 MIR4419B-201ENST00000577260 68 ntBASIC2.66□□□□□ -1.98
PCF11O94913 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC2.66□□□□□ -1.98
PCF11O94913 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
PCF11O94913 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.66□□□□□ -1.98
PCF11O94913 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
PCF11O94913 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC2.66□□□□□ -1.98
PCF11O94913 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
PCF11O94913 AC009474.2-201ENST00000451383 136 ntBASIC2.66□□□□□ -1.98
PCF11O94913 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC2.66□□□□□ -1.98
PCF11O94913 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC2.66□□□□□ -1.98
PCF11O94913 AC104581.2-201ENST00000572227 430 ntBASIC2.66□□□□□ -1.98
PCF11O94913 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC2.66□□□□□ -1.98
PCF11O94913 AC012150.2-201ENST00000621300 544 ntBASIC2.66□□□□□ -1.98
PCF11O94913 AC090617.7-201ENST00000623952 126 ntBASIC2.66□□□□□ -1.98
PCF11O94913 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.98
PCF11O94913 AP002907.1-201ENST00000606361 1430 ntBASIC2.65□□□□□ -1.99
PCF11O94913 ZNF37BP-203ENST00000452306 1352 ntBASIC2.65□□□□□ -1.99
PCF11O94913 RNU6-837P-201ENST00000391056 108 ntBASIC2.65□□□□□ -1.99
PCF11O94913 MTATP6P4-201ENST00000427725 675 ntBASIC2.65□□□□□ -1.99
PCF11O94913 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.65□□□□□ -1.99
PCF11O94913 AC087879.1-201ENST00000474343 374 ntBASIC2.65□□□□□ -1.99
PCF11O94913 HMGN1P7-201ENST00000491722 313 ntBASIC2.65□□□□□ -1.99
PCF11O94913 AP001804.3-201ENST00000525146 880 ntBASIC2.65□□□□□ -1.99
PCF11O94913 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC2.65□□□□□ -1.99
PCF11O94913 AC004923.2-201ENST00000529649 369 ntBASIC2.65□□□□□ -1.99
PCF11O94913 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC2.65□□□□□ -1.99
PCF11O94913 AC113368.1-201ENST00000603736 382 ntBASIC2.65□□□□□ -1.99
PCF11O94913 AC073111.2-201ENST00000605657 1075 ntBASIC2.65□□□□□ -1.99
PCF11O94913 AC020923.1-201ENST00000624021 917 ntBASIC2.65□□□□□ -1.99
PCF11O94913 MTCO1P4-201ENST00000520516 1409 ntBASIC2.64□□□□□ -1.99
PCF11O94913 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC2.64□□□□□ -1.99
PCF11O94913 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.64□□□□□ -1.99
PCF11O94913 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC2.64□□□□□ -1.99
PCF11O94913 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC2.64□□□□□ -1.99
PCF11O94913 SSXP1-201ENST00000453640 473 ntBASIC2.64□□□□□ -1.99
PCF11O94913 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.64□□□□□ -1.99
PCF11O94913 RPS23P3-201ENST00000470993 430 ntBASIC2.64□□□□□ -1.99
PCF11O94913 AC090255.1-201ENST00000495779 349 ntBASIC2.64□□□□□ -1.99
PCF11O94913 MTCYBP17-201ENST00000503579 789 ntBASIC2.64□□□□□ -1.99
PCF11O94913 HMGB1P22-201ENST00000505315 124 ntBASIC2.64□□□□□ -1.99
PCF11O94913 RNU6-56P-201ENST00000516986 93 ntBASIC2.64□□□□□ -1.99
PCF11O94913 AC008015.1-201ENST00000555505 465 ntBASIC2.64□□□□□ -1.99
PCF11O94913 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC2.64□□□□□ -1.99
PCF11O94913 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
PCF11O94913 AC107954.1-201ENST00000565906 727 ntBASIC2.64□□□□□ -1.99
PCF11O94913 MIR4285-201ENST00000581001 85 ntBASIC2.64□□□□□ -1.99
PCF11O94913 MTND4P23-201ENST00000447723 1363 ntBASIC2.63□□□□□ -1.99
PCF11O94913 HMGB3P2-201ENST00000411913 584 ntBASIC2.63□□□□□ -1.99
PCF11O94913 AL031659.1-201ENST00000447075 539 ntBASIC2.63□□□□□ -1.99
PCF11O94913 DPPA3P1-201ENST00000448050 469 ntBASIC2.63□□□□□ -1.99
PCF11O94913 RPL21P39-201ENST00000463605 483 ntBASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms