Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 AC009812.4-201ENST00000569134 1805 ntBASIC1.72□□□□□ -2.13
SDCBPO00560 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
SDCBPO00560 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC1.71□□□□□ -2.14
SDCBPO00560 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
SDCBPO00560 ZBTB8OSP1-201ENST00000342688 498 ntBASIC1.71□□□□□ -2.14
SDCBPO00560 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.71□□□□□ -2.14
SDCBPO00560 MIR449A-201ENST00000362113 91 ntBASIC1.71□□□□□ -2.14
SDCBPO00560 RNU6-251P-201ENST00000363235 104 ntBASIC1.71□□□□□ -2.14
SDCBPO00560 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
SDCBPO00560 XGY1-201ENST00000381172 446 ntBASIC1.71□□□□□ -2.14
SDCBPO00560 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
SDCBPO00560 AL139098.1-201ENST00000407291 389 ntBASIC1.71□□□□□ -2.14
SDCBPO00560 AL513331.1-201ENST00000411908 397 ntBASIC1.71□□□□□ -2.14
SDCBPO00560 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC1.71□□□□□ -2.14
SDCBPO00560 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC1.71□□□□□ -2.14
SDCBPO00560 AC234781.2-201ENST00000426370 994 ntBASIC1.71□□□□□ -2.14
SDCBPO00560 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.71□□□□□ -2.14
SDCBPO00560 OR4K11P-201ENST00000431829 904 ntBASIC1.71□□□□□ -2.14
SDCBPO00560 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC1.71□□□□□ -2.14
SDCBPO00560 AL714022.1-201ENST00000439897 151 ntBASIC1.71□□□□□ -2.14
SDCBPO00560 IFNA11P-201ENST00000446352 526 ntBASIC1.71□□□□□ -2.14
SDCBPO00560 AL353705.4-201ENST00000449661 238 ntBASIC1.71□□□□□ -2.14
SDCBPO00560 NDUFA5P7-201ENST00000452914 242 ntBASIC1.71□□□□□ -2.14
SDCBPO00560 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC1.71□□□□□ -2.14
SDCBPO00560 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC1.71□□□□□ -2.14
SDCBPO00560 AC128713.1-201ENST00000471495 306 ntBASIC1.71□□□□□ -2.14
SDCBPO00560 AC116337.2-201ENST00000477662 156 ntBASIC1.71□□□□□ -2.14
SDCBPO00560 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC1.71□□□□□ -2.14
SDCBPO00560 AC147055.4-201ENST00000504399 745 ntBASIC1.71□□□□□ -2.14
SDCBPO00560 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC1.71□□□□□ -2.14
SDCBPO00560 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.71□□□□□ -2.14
SDCBPO00560 RNU6-798P-201ENST00000516912 103 ntBASIC1.71□□□□□ -2.14
SDCBPO00560 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC1.71□□□□□ -2.14
SDCBPO00560 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC1.71□□□□□ -2.14
SDCBPO00560 AP000916.1-201ENST00000533869 835 ntBASIC1.71□□□□□ -2.14
SDCBPO00560 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC1.71□□□□□ -2.14
SDCBPO00560 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
SDCBPO00560 AMZ2P1-203ENST00000565833 850 ntBASIC1.71□□□□□ -2.14
SDCBPO00560 AC009127.3-201ENST00000570531 403 ntBASIC1.71□□□□□ -2.14
SDCBPO00560 LARP7P2-201ENST00000575306 125 ntBASIC1.71□□□□□ -2.14
SDCBPO00560 MIR4435-1-201ENST00000582552 80 ntBASIC1.71□□□□□ -2.14
SDCBPO00560 MIR3935-201ENST00000583472 104 ntBASIC1.71□□□□□ -2.14
SDCBPO00560 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC1.71□□□□□ -2.14
SDCBPO00560 RPS15AP11-201ENST00000594193 385 ntBASIC1.71□□□□□ -2.14
SDCBPO00560 APOOP1-201ENST00000604695 592 ntBASIC1.71□□□□□ -2.14
SDCBPO00560 AC120053.1-201ENST00000607706 736 ntBASIC1.71□□□□□ -2.14
SDCBPO00560 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC1.71□□□□□ -2.14
SDCBPO00560 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC1.71□□□□□ -2.14
SDCBPO00560 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC1.71□□□□□ -2.14
SDCBPO00560 DUXAP9-208ENST00000622815 614 ntBASIC1.71□□□□□ -2.14
SDCBPO00560 AC106730.3-201ENST00000624568 641 ntBASIC1.71□□□□□ -2.14
SDCBPO00560 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.71□□□□□ -2.14
SDCBPO00560 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.71□□□□□ -2.14
SDCBPO00560 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC1.71□□□□□ -2.14
SDCBPO00560 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.71□□□□□ -2.14
SDCBPO00560 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC1.71□□□□□ -2.14
SDCBPO00560 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC1.7□□□□□ -2.14
SDCBPO00560 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.7□□□□□ -2.14
SDCBPO00560 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.7□□□□□ -2.14
SDCBPO00560 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
SDCBPO00560 RNU6-582P-201ENST00000362989 107 ntBASIC1.7□□□□□ -2.14
SDCBPO00560 RNU6-115P-201ENST00000364310 107 ntBASIC1.7□□□□□ -2.14
SDCBPO00560 SNORA68.1-201ENST00000364537 132 ntBASIC1.7□□□□□ -2.14
SDCBPO00560 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
SDCBPO00560 OR1L1-202ENST00000373686 1083 ntBASIC1.7□□□□□ -2.14
SDCBPO00560 SNORA6-201ENST00000384033 151 ntBASIC1.7□□□□□ -2.14
SDCBPO00560 MIR135A2-201ENST00000384854 100 ntBASIC1.7□□□□□ -2.14
SDCBPO00560 RNU2-47P-201ENST00000410649 186 ntBASIC1.7□□□□□ -2.14
SDCBPO00560 RNU4-72P-201ENST00000410754 173 ntBASIC1.7□□□□□ -2.14
SDCBPO00560 AL133384.1-201ENST00000412744 351 ntBASIC1.7□□□□□ -2.14
SDCBPO00560 Z93242.1-201ENST00000427102 353 ntBASIC1.7□□□□□ -2.14
SDCBPO00560 RPL7L1P10-201ENST00000427790 463 ntBASIC1.7□□□□□ -2.14
SDCBPO00560 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC1.7□□□□□ -2.14
SDCBPO00560 MTCYBP3-201ENST00000445588 1137 ntBASIC1.7□□□□□ -2.14
SDCBPO00560 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.7□□□□□ -2.14
SDCBPO00560 MTCO3P11-201ENST00000455103 774 ntBASIC1.7□□□□□ -2.14
SDCBPO00560 AC092798.1-201ENST00000458542 409 ntBASIC1.7□□□□□ -2.14
SDCBPO00560 RNU7-26P-201ENST00000458980 63 ntBASIC1.7□□□□□ -2.14
SDCBPO00560 AC108734.3-201ENST00000481241 1165 ntBASIC1.7□□□□□ -2.14
SDCBPO00560 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC1.7□□□□□ -2.14
SDCBPO00560 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
SDCBPO00560 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC1.7□□□□□ -2.14
SDCBPO00560 MRPS36P2-201ENST00000512569 299 ntBASIC1.7□□□□□ -2.14
SDCBPO00560 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC1.7□□□□□ -2.14
SDCBPO00560 RNU6-885P-201ENST00000516607 104 ntBASIC1.7□□□□□ -2.14
SDCBPO00560 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC1.7□□□□□ -2.14
SDCBPO00560 NDUFS5P6-201ENST00000529136 295 ntBASIC1.7□□□□□ -2.14
SDCBPO00560 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC1.7□□□□□ -2.14
SDCBPO00560 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
SDCBPO00560 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC1.7□□□□□ -2.14
SDCBPO00560 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC1.7□□□□□ -2.14
SDCBPO00560 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC1.7□□□□□ -2.14
SDCBPO00560 MTCO1P40-201ENST00000574371 625 ntBASIC1.7□□□□□ -2.14
SDCBPO00560 ANKRD36BP2-206ENST00000575193 1245 ntBASIC1.7□□□□□ -2.14
SDCBPO00560 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
SDCBPO00560 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC1.7□□□□□ -2.14
SDCBPO00560 VN1R9P-201ENST00000614184 867 ntBASIC1.7□□□□□ -2.14
SDCBPO00560 HMGB1P24-202ENST00000615653 685 ntBASIC1.7□□□□□ -2.14
SDCBPO00560 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC1.7□□□□□ -2.14
SDCBPO00560 AC132825.7-201ENST00000638744 335 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms