Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3□□□□□ -1.93
TRBV4-1A0A0J9YWV2 RNU6-956P-201ENST00000458868 103 ntBASIC3□□□□□ -1.93
TRBV4-1A0A0J9YWV2 RPL7P15-201ENST00000461190 712 ntBASIC3□□□□□ -1.93
TRBV4-1A0A0J9YWV2 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3□□□□□ -1.93
TRBV4-1A0A0J9YWV2 ACTR3P3-201ENST00000480448 893 ntBASIC3□□□□□ -1.93
TRBV4-1A0A0J9YWV2 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3□□□□□ -1.93
TRBV4-1A0A0J9YWV2 HMGB3P15-201ENST00000507326 574 ntBASIC3□□□□□ -1.93
TRBV4-1A0A0J9YWV2 CBX3P3-201ENST00000508108 532 ntBASIC3□□□□□ -1.93
TRBV4-1A0A0J9YWV2 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3□□□□□ -1.93
TRBV4-1A0A0J9YWV2 AC022447.1-201ENST00000515358 464 ntBASIC3□□□□□ -1.93
TRBV4-1A0A0J9YWV2 RNU1-95P-201ENST00000516357 160 ntBASIC3□□□□□ -1.93
TRBV4-1A0A0J9YWV2 RNU1-128P-201ENST00000516704 160 ntBASIC3□□□□□ -1.93
TRBV4-1A0A0J9YWV2 RPL12P22-201ENST00000519073 490 ntBASIC3□□□□□ -1.93
TRBV4-1A0A0J9YWV2 AC245166.1-201ENST00000521012 253 ntBASIC3□□□□□ -1.93
TRBV4-1A0A0J9YWV2 AC107934.1-201ENST00000522215 217 ntBASIC3□□□□□ -1.93
TRBV4-1A0A0J9YWV2 ERHP1-201ENST00000523006 310 ntBASIC3□□□□□ -1.93
TRBV4-1A0A0J9YWV2 AP000873.5-201ENST00000533906 236 ntBASIC3□□□□□ -1.93
TRBV4-1A0A0J9YWV2 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3□□□□□ -1.93
TRBV4-1A0A0J9YWV2 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3□□□□□ -1.93
TRBV4-1A0A0J9YWV2 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC3□□□□□ -1.93
TRBV4-1A0A0J9YWV2 RPL21P5-201ENST00000554662 472 ntBASIC3□□□□□ -1.93
TRBV4-1A0A0J9YWV2 AL157394.1-201ENST00000562983 1224 ntBASIC3□□□□□ -1.93
TRBV4-1A0A0J9YWV2 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3□□□□□ -1.93
TRBV4-1A0A0J9YWV2 MIR3146-201ENST00000580367 79 ntBASIC3□□□□□ -1.93
TRBV4-1A0A0J9YWV2 MIR3118-1-201ENST00000581787 76 ntBASIC3□□□□□ -1.93
TRBV4-1A0A0J9YWV2 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC3□□□□□ -1.93
TRBV4-1A0A0J9YWV2 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3□□□□□ -1.93
TRBV4-1A0A0J9YWV2 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3□□□□□ -1.93
TRBV4-1A0A0J9YWV2 BNIP3P8-201ENST00000597863 560 ntBASIC3□□□□□ -1.93
TRBV4-1A0A0J9YWV2 AC064872.1-201ENST00000604823 1072 ntBASIC3□□□□□ -1.93
TRBV4-1A0A0J9YWV2 RN7SKP299-201ENST00000606679 301 ntBASIC3□□□□□ -1.93
TRBV4-1A0A0J9YWV2 BX664608.1-201ENST00000610519 487 ntBASIC3□□□□□ -1.93
TRBV4-1A0A0J9YWV2 AC245517.5-201ENST00000611529 162 ntBASIC3□□□□□ -1.93
TRBV4-1A0A0J9YWV2 AC009509.4-201ENST00000619202 509 ntBASIC3□□□□□ -1.93
TRBV4-1A0A0J9YWV2 PLCE1P1-201ENST00000622094 305 ntBASIC3□□□□□ -1.93
TRBV4-1A0A0J9YWV2 AC095031.1-201ENST00000623685 672 ntBASIC3□□□□□ -1.93
TRBV4-1A0A0J9YWV2 AC068724.3-201ENST00000625906 87 ntBASIC3□□□□□ -1.93
TRBV4-1A0A0J9YWV2 AC010149.2-201ENST00000637608 315 ntBASIC3□□□□□ -1.93
TRBV4-1A0A0J9YWV2 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
TRBV4-1A0A0J9YWV2 AF117829.1-206ENST00000621883 3802 ntBASIC3□□□□□ -1.93
TRBV4-1A0A0J9YWV2 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
TRBV4-1A0A0J9YWV2 AC005183.1-201ENST00000603687 1979 ntBASIC3□□□□□ -1.93
TRBV4-1A0A0J9YWV2 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3□□□□□ -1.93
TRBV4-1A0A0J9YWV2 AC092326.2-201ENST00000624772 1561 ntBASIC3□□□□□ -1.93
TRBV4-1A0A0J9YWV2 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
TRBV4-1A0A0J9YWV2 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC2.99□□□□□ -1.93
TRBV4-1A0A0J9YWV2 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
TRBV4-1A0A0J9YWV2 SDAD1P2-201ENST00000441308 2028 ntBASIC2.99□□□□□ -1.93
TRBV4-1A0A0J9YWV2 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
TRBV4-1A0A0J9YWV2 RNU6-50P-201ENST00000362356 103 ntBASIC2.99□□□□□ -1.93
TRBV4-1A0A0J9YWV2 SNORA23-201ENST00000365128 182 ntBASIC2.99□□□□□ -1.93
TRBV4-1A0A0J9YWV2 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
TRBV4-1A0A0J9YWV2 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.99□□□□□ -1.93
TRBV4-1A0A0J9YWV2 SNORA5A-201ENST00000384111 134 ntBASIC2.99□□□□□ -1.93
TRBV4-1A0A0J9YWV2 RNU6-297P-201ENST00000384636 107 ntBASIC2.99□□□□□ -1.93
TRBV4-1A0A0J9YWV2 RNU6-248P-201ENST00000410720 107 ntBASIC2.99□□□□□ -1.93
TRBV4-1A0A0J9YWV2 RPL32P35-201ENST00000415214 394 ntBASIC2.99□□□□□ -1.93
TRBV4-1A0A0J9YWV2 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.99□□□□□ -1.93
TRBV4-1A0A0J9YWV2 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC2.99□□□□□ -1.93
TRBV4-1A0A0J9YWV2 AL662791.1-201ENST00000441992 928 ntBASIC2.99□□□□□ -1.93
TRBV4-1A0A0J9YWV2 AL022238.1-201ENST00000442557 355 ntBASIC2.99□□□□□ -1.93
TRBV4-1A0A0J9YWV2 MTND6P13-201ENST00000443510 523 ntBASIC2.99□□□□□ -1.93
TRBV4-1A0A0J9YWV2 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC2.99□□□□□ -1.93
TRBV4-1A0A0J9YWV2 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC2.99□□□□□ -1.93
TRBV4-1A0A0J9YWV2 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
TRBV4-1A0A0J9YWV2 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC2.99□□□□□ -1.93
TRBV4-1A0A0J9YWV2 LEF1-218ENST00000512172 598 ntTSL 2 BASIC2.99□□□□□ -1.93
TRBV4-1A0A0J9YWV2 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.99□□□□□ -1.93
TRBV4-1A0A0J9YWV2 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.99□□□□□ -1.93
TRBV4-1A0A0J9YWV2 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC2.99□□□□□ -1.93
TRBV4-1A0A0J9YWV2 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC2.99□□□□□ -1.93
TRBV4-1A0A0J9YWV2 AL391156.1-201ENST00000554965 554 ntBASIC2.99□□□□□ -1.93
TRBV4-1A0A0J9YWV2 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC2.99□□□□□ -1.93
TRBV4-1A0A0J9YWV2 MIR3160-1-201ENST00000577972 85 ntBASIC2.99□□□□□ -1.93
TRBV4-1A0A0J9YWV2 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.99□□□□□ -1.93
TRBV4-1A0A0J9YWV2 HMGN1P30-201ENST00000589286 268 ntBASIC2.99□□□□□ -1.93
TRBV4-1A0A0J9YWV2 AL606834.2-201ENST00000602954 668 ntBASIC2.99□□□□□ -1.93
TRBV4-1A0A0J9YWV2 AC064807.4-201ENST00000607201 407 ntBASIC2.99□□□□□ -1.93
TRBV4-1A0A0J9YWV2 RNU6-87P-201ENST00000607561 108 ntBASIC2.99□□□□□ -1.93
TRBV4-1A0A0J9YWV2 AC004696.1-201ENST00000614345 607 ntBASIC2.99□□□□□ -1.93
TRBV4-1A0A0J9YWV2 AC091953.2-201ENST00000623979 160 ntBASIC2.99□□□□□ -1.93
TRBV4-1A0A0J9YWV2 AC090582.1-201ENST00000636321 199 ntBASIC2.99□□□□□ -1.93
TRBV4-1A0A0J9YWV2 AC009093.8-201ENST00000641769 292 ntBASIC2.99□□□□□ -1.93
TRBV4-1A0A0J9YWV2 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
TRBV4-1A0A0J9YWV2 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
TRBV4-1A0A0J9YWV2 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC2.99□□□□□ -1.93
TRBV4-1A0A0J9YWV2 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
TRBV4-1A0A0J9YWV2 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
TRBV4-1A0A0J9YWV2 AC002546.1-201ENST00000588041 2504 ntBASIC2.98□□□□□ -1.93
TRBV4-1A0A0J9YWV2 TEX21P-201ENST00000447107 1476 ntBASIC2.98□□□□□ -1.93
TRBV4-1A0A0J9YWV2 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
TRBV4-1A0A0J9YWV2 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
TRBV4-1A0A0J9YWV2 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
TRBV4-1A0A0J9YWV2 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.98□□□□□ -1.93
TRBV4-1A0A0J9YWV2 SNORA75-201ENST00000384158 137 ntBASIC2.98□□□□□ -1.93
TRBV4-1A0A0J9YWV2 FCF1P10-201ENST00000407590 479 ntBASIC2.98□□□□□ -1.93
TRBV4-1A0A0J9YWV2 RN7SKP263-201ENST00000411194 309 ntBASIC2.98□□□□□ -1.93
TRBV4-1A0A0J9YWV2 RPS3AP3-201ENST00000411933 242 ntBASIC2.98□□□□□ -1.93
TRBV4-1A0A0J9YWV2 BTF3L4P1-201ENST00000413813 468 ntBASIC2.98□□□□□ -1.93
TRBV4-1A0A0J9YWV2 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 130.1 ms