Protein–RNA interactions for Protein: A0A0B4J280

TRAV40, T-cell receptor alpha variable 40 (Fragment), humanhuman

Predictions only

Length 105 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40A0A0B4J280 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
TRAV40A0A0B4J280 AP003122.5-201ENST00000527668 3766 ntBASIC2.19□□□□□ -2.06
TRAV40A0A0B4J280 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
TRAV40A0A0B4J280 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
TRAV40A0A0B4J280 AL672167.1-206ENST00000356293 943 ntBASIC2.18□□□□□ -2.06
TRAV40A0A0B4J280 RNU4-82P-201ENST00000362443 140 ntBASIC2.18□□□□□ -2.06
TRAV40A0A0B4J280 RNU6-878P-201ENST00000384578 110 ntBASIC2.18□□□□□ -2.06
TRAV40A0A0B4J280 AL356057.3-201ENST00000402607 340 ntBASIC2.18□□□□□ -2.06
TRAV40A0A0B4J280 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.18□□□□□ -2.06
TRAV40A0A0B4J280 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC2.18□□□□□ -2.06
TRAV40A0A0B4J280 HMGB1P49-201ENST00000418882 569 ntBASIC2.18□□□□□ -2.06
TRAV40A0A0B4J280 AL139413.1-201ENST00000421309 217 ntBASIC2.18□□□□□ -2.06
TRAV40A0A0B4J280 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC2.18□□□□□ -2.06
TRAV40A0A0B4J280 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC2.18□□□□□ -2.06
TRAV40A0A0B4J280 AL593851.1-201ENST00000426171 157 ntBASIC2.18□□□□□ -2.06
TRAV40A0A0B4J280 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.18□□□□□ -2.06
TRAV40A0A0B4J280 EZH2P1-201ENST00000431167 291 ntBASIC2.18□□□□□ -2.06
TRAV40A0A0B4J280 RPL23AP74-201ENST00000437246 471 ntBASIC2.18□□□□□ -2.06
TRAV40A0A0B4J280 HSPE1P28-201ENST00000443139 211 ntBASIC2.18□□□□□ -2.06
TRAV40A0A0B4J280 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC2.18□□□□□ -2.06
TRAV40A0A0B4J280 HMGB1P15-201ENST00000453854 435 ntBASIC2.18□□□□□ -2.06
TRAV40A0A0B4J280 Z82190.1-201ENST00000454534 490 ntBASIC2.18□□□□□ -2.06
TRAV40A0A0B4J280 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC2.18□□□□□ -2.06
TRAV40A0A0B4J280 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
TRAV40A0A0B4J280 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.18□□□□□ -2.06
TRAV40A0A0B4J280 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.18□□□□□ -2.06
TRAV40A0A0B4J280 AC004062.1-201ENST00000509926 645 ntBASIC2.18□□□□□ -2.06
TRAV40A0A0B4J280 RNU6-1095P-201ENST00000516148 108 ntBASIC2.18□□□□□ -2.06
TRAV40A0A0B4J280 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC2.18□□□□□ -2.06
TRAV40A0A0B4J280 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC2.18□□□□□ -2.06
TRAV40A0A0B4J280 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC2.18□□□□□ -2.06
TRAV40A0A0B4J280 AC109635.4-202ENST00000531666 412 ntBASIC2.18□□□□□ -2.06
TRAV40A0A0B4J280 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC2.18□□□□□ -2.06
TRAV40A0A0B4J280 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC2.18□□□□□ -2.06
TRAV40A0A0B4J280 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC2.18□□□□□ -2.06
TRAV40A0A0B4J280 AC087465.1-201ENST00000560574 245 ntBASIC2.18□□□□□ -2.06
TRAV40A0A0B4J280 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC2.18□□□□□ -2.06
TRAV40A0A0B4J280 AC009094.1-201ENST00000564443 426 ntBASIC2.18□□□□□ -2.06
TRAV40A0A0B4J280 AC009712.1-201ENST00000564938 316 ntBASIC2.18□□□□□ -2.06
TRAV40A0A0B4J280 AC005951.1-201ENST00000576706 485 ntBASIC2.18□□□□□ -2.06
TRAV40A0A0B4J280 MIR3605-201ENST00000583214 100 ntBASIC2.18□□□□□ -2.06
TRAV40A0A0B4J280 MIR4635-201ENST00000583759 79 ntBASIC2.18□□□□□ -2.06
TRAV40A0A0B4J280 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.18□□□□□ -2.06
TRAV40A0A0B4J280 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC2.18□□□□□ -2.06
TRAV40A0A0B4J280 AC004853.1-201ENST00000604902 698 ntBASIC2.18□□□□□ -2.06
TRAV40A0A0B4J280 AL445264.1-201ENST00000621719 171 ntBASIC2.18□□□□□ -2.06
TRAV40A0A0B4J280 AP000676.4-201ENST00000624659 623 ntBASIC2.18□□□□□ -2.06
TRAV40A0A0B4J280 AC092192.1-201ENST00000633154 1018 ntBASIC2.18□□□□□ -2.06
TRAV40A0A0B4J280 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
TRAV40A0A0B4J280 API5P2-201ENST00000397055 1498 ntBASIC2.18□□□□□ -2.06
TRAV40A0A0B4J280 HSP90AA4P-202ENST00000506915 2228 ntBASIC2.18□□□□□ -2.06
TRAV40A0A0B4J280 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.18□□□□□ -2.06
TRAV40A0A0B4J280 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
TRAV40A0A0B4J280 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
TRAV40A0A0B4J280 AP001350.1-201ENST00000601906 1524 ntBASIC2.17□□□□□ -2.06
TRAV40A0A0B4J280 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC2.17□□□□□ -2.06
TRAV40A0A0B4J280 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.17□□□□□ -2.06
TRAV40A0A0B4J280 AL391994.1-201ENST00000254724 282 ntBASIC2.17□□□□□ -2.06
TRAV40A0A0B4J280 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
TRAV40A0A0B4J280 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
TRAV40A0A0B4J280 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
TRAV40A0A0B4J280 SNORD62.1-201ENST00000362541 86 ntBASIC2.17□□□□□ -2.06
TRAV40A0A0B4J280 SNORA31-201ENST00000362607 130 ntBASIC2.17□□□□□ -2.06
TRAV40A0A0B4J280 RNU6-1074P-201ENST00000383995 104 ntBASIC2.17□□□□□ -2.06
TRAV40A0A0B4J280 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
TRAV40A0A0B4J280 RNU6-837P-201ENST00000391056 108 ntBASIC2.17□□□□□ -2.06
TRAV40A0A0B4J280 HMGB1P17-201ENST00000403495 628 ntBASIC2.17□□□□□ -2.06
TRAV40A0A0B4J280 MRPL50P2-201ENST00000416821 482 ntBASIC2.17□□□□□ -2.06
TRAV40A0A0B4J280 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC2.17□□□□□ -2.06
TRAV40A0A0B4J280 NEK4P1-201ENST00000433383 879 ntBASIC2.17□□□□□ -2.06
TRAV40A0A0B4J280 VDAC1P3-201ENST00000434069 851 ntBASIC2.17□□□□□ -2.06
TRAV40A0A0B4J280 AC112220.1-201ENST00000434628 355 ntBASIC2.17□□□□□ -2.06
TRAV40A0A0B4J280 RPS29P6-201ENST00000438196 145 ntBASIC2.17□□□□□ -2.06
TRAV40A0A0B4J280 MTND1P26-201ENST00000440488 538 ntBASIC2.17□□□□□ -2.06
TRAV40A0A0B4J280 AL662791.1-201ENST00000441992 928 ntBASIC2.17□□□□□ -2.06
TRAV40A0A0B4J280 AL606662.1-201ENST00000445763 553 ntBASIC2.17□□□□□ -2.06
TRAV40A0A0B4J280 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC2.17□□□□□ -2.06
TRAV40A0A0B4J280 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.17□□□□□ -2.06
TRAV40A0A0B4J280 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC2.17□□□□□ -2.06
TRAV40A0A0B4J280 AC008571.1-201ENST00000467232 300 ntBASIC2.17□□□□□ -2.06
TRAV40A0A0B4J280 AC090525.1-201ENST00000479116 478 ntBASIC2.17□□□□□ -2.06
TRAV40A0A0B4J280 SRIP1-201ENST00000489235 288 ntBASIC2.17□□□□□ -2.06
TRAV40A0A0B4J280 AC114981.1-201ENST00000503897 678 ntBASIC2.17□□□□□ -2.06
TRAV40A0A0B4J280 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
TRAV40A0A0B4J280 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC2.17□□□□□ -2.06
TRAV40A0A0B4J280 CBX3P3-201ENST00000508108 532 ntBASIC2.17□□□□□ -2.06
TRAV40A0A0B4J280 AC010486.1-201ENST00000511793 424 ntBASIC2.17□□□□□ -2.06
TRAV40A0A0B4J280 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC2.17□□□□□ -2.06
TRAV40A0A0B4J280 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC2.17□□□□□ -2.06
TRAV40A0A0B4J280 RNU4-29P-201ENST00000515943 174 ntBASIC2.17□□□□□ -2.06
TRAV40A0A0B4J280 AC105185.1-201ENST00000518705 535 ntBASIC2.17□□□□□ -2.06
TRAV40A0A0B4J280 HSPA8P13-201ENST00000523715 472 ntBASIC2.17□□□□□ -2.06
TRAV40A0A0B4J280 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
TRAV40A0A0B4J280 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC2.17□□□□□ -2.06
TRAV40A0A0B4J280 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC2.17□□□□□ -2.06
TRAV40A0A0B4J280 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.17□□□□□ -2.06
TRAV40A0A0B4J280 OR6C7P-201ENST00000547875 934 ntBASIC2.17□□□□□ -2.06
TRAV40A0A0B4J280 SYF2P1-201ENST00000550658 413 ntBASIC2.17□□□□□ -2.06
TRAV40A0A0B4J280 SETP7-201ENST00000552169 453 ntBASIC2.17□□□□□ -2.06
TRAV40A0A0B4J280 MTND3P12-201ENST00000559068 328 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms