Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SCN10AQ9Y5Y9 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.96■□□□□ 0.95
SCN10AQ9Y5Y9 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SCN10AQ9Y5Y9 SDHD-206ENST00000528182 754 ntTSL 3 BASIC20.96■□□□□ 0.95
SCN10AQ9Y5Y9 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC20.96■□□□□ 0.95
SCN10AQ9Y5Y9 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SCN10AQ9Y5Y9 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
SCN10AQ9Y5Y9 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SCN10AQ9Y5Y9 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC20.96■□□□□ 0.95
SCN10AQ9Y5Y9 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SCN10AQ9Y5Y9 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
SCN10AQ9Y5Y9 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC20.96■□□□□ 0.95
SCN10AQ9Y5Y9 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SCN10AQ9Y5Y9 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
SCN10AQ9Y5Y9 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SCN10AQ9Y5Y9 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SCN10AQ9Y5Y9 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SCN10AQ9Y5Y9 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SCN10AQ9Y5Y9 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SCN10AQ9Y5Y9 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SCN10AQ9Y5Y9 MIR3652-201ENST00000579335 131 ntBASIC20.96■□□□□ 0.95
SCN10AQ9Y5Y9 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SCN10AQ9Y5Y9 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC20.96■□□□□ 0.95
SCN10AQ9Y5Y9 IFNL4P1-201ENST00000607083 540 ntBASIC20.96■□□□□ 0.95
SCN10AQ9Y5Y9 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.95■□□□□ 0.94
SCN10AQ9Y5Y9 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SCN10AQ9Y5Y9 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC20.95■□□□□ 0.94
SCN10AQ9Y5Y9 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
SCN10AQ9Y5Y9 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.95■□□□□ 0.94
SCN10AQ9Y5Y9 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SCN10AQ9Y5Y9 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.95■□□□□ 0.94
SCN10AQ9Y5Y9 KRT8P3-201ENST00000519669 1449 ntBASIC20.95■□□□□ 0.94
SCN10AQ9Y5Y9 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
SCN10AQ9Y5Y9 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.95■□□□□ 0.94
SCN10AQ9Y5Y9 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SCN10AQ9Y5Y9 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SCN10AQ9Y5Y9 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC20.95■□□□□ 0.94
SCN10AQ9Y5Y9 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC20.95■□□□□ 0.94
SCN10AQ9Y5Y9 RN7SL510P-201ENST00000581311 263 ntBASIC20.95■□□□□ 0.94
SCN10AQ9Y5Y9 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
SCN10AQ9Y5Y9 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC20.95■□□□□ 0.94
SCN10AQ9Y5Y9 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC20.95■□□□□ 0.94
SCN10AQ9Y5Y9 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC20.95■□□□□ 0.94
SCN10AQ9Y5Y9 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
SCN10AQ9Y5Y9 AL157888.1-201ENST00000631930 593 ntBASIC20.95■□□□□ 0.94
SCN10AQ9Y5Y9 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SCN10AQ9Y5Y9 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.95■□□□□ 0.94
SCN10AQ9Y5Y9 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SCN10AQ9Y5Y9 KRT8P10-201ENST00000450021 1447 ntBASIC20.94■□□□□ 0.94
SCN10AQ9Y5Y9 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
SCN10AQ9Y5Y9 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
SCN10AQ9Y5Y9 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SCN10AQ9Y5Y9 MCCD1P1-208ENST00000445732 328 ntBASIC20.94■□□□□ 0.94
SCN10AQ9Y5Y9 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SCN10AQ9Y5Y9 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
SCN10AQ9Y5Y9 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC20.94■□□□□ 0.94
SCN10AQ9Y5Y9 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SCN10AQ9Y5Y9 AC024243.1-201ENST00000609234 778 ntBASIC20.94■□□□□ 0.94
SCN10AQ9Y5Y9 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SCN10AQ9Y5Y9 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SCN10AQ9Y5Y9 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
SCN10AQ9Y5Y9 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.94■□□□□ 0.94
SCN10AQ9Y5Y9 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SCN10AQ9Y5Y9 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SCN10AQ9Y5Y9 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.94■□□□□ 0.94
SCN10AQ9Y5Y9 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SCN10AQ9Y5Y9 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SCN10AQ9Y5Y9 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SCN10AQ9Y5Y9 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC20.94■□□□□ 0.94
SCN10AQ9Y5Y9 SKP2-204ENST00000508514 821 ntTSL 3 BASIC20.94■□□□□ 0.94
SCN10AQ9Y5Y9 AC079602.3-201ENST00000623931 403 ntBASIC20.94■□□□□ 0.94
SCN10AQ9Y5Y9 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC20.94■□□□□ 0.94
SCN10AQ9Y5Y9 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.93■□□□□ 0.94
SCN10AQ9Y5Y9 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SCN10AQ9Y5Y9 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SCN10AQ9Y5Y9 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SCN10AQ9Y5Y9 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SCN10AQ9Y5Y9 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SCN10AQ9Y5Y9 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC20.93■□□□□ 0.94
SCN10AQ9Y5Y9 BX276092.5-203ENST00000456199 560 ntBASIC20.93■□□□□ 0.94
SCN10AQ9Y5Y9 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC20.93■□□□□ 0.94
SCN10AQ9Y5Y9 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SCN10AQ9Y5Y9 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SCN10AQ9Y5Y9 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
SCN10AQ9Y5Y9 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC20.93■□□□□ 0.94
SCN10AQ9Y5Y9 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
SCN10AQ9Y5Y9 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SCN10AQ9Y5Y9 CHCHD2P8-201ENST00000429873 447 ntBASIC20.92■□□□□ 0.94
SCN10AQ9Y5Y9 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC20.92■□□□□ 0.94
SCN10AQ9Y5Y9 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC20.92■□□□□ 0.94
SCN10AQ9Y5Y9 AC092119.3-201ENST00000612618 583 ntBASIC20.92■□□□□ 0.94
SCN10AQ9Y5Y9 SPEG-225ENST00000617028 815 ntTSL 5 BASIC20.92■□□□□ 0.94
SCN10AQ9Y5Y9 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SCN10AQ9Y5Y9 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SCN10AQ9Y5Y9 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
SCN10AQ9Y5Y9 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SCN10AQ9Y5Y9 AL162741.1-201ENST00000565563 1558 ntBASIC20.92■□□□□ 0.94
SCN10AQ9Y5Y9 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SCN10AQ9Y5Y9 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.92■□□□□ 0.94
SCN10AQ9Y5Y9 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms