Protein–RNA interactions for Protein: Q9Y5E7

PCDHB2, Protocadherin beta-2, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2Q9Y5E7 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.92■□□□□ 0.94
PCDHB2Q9Y5E7 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.92■□□□□ 0.94
PCDHB2Q9Y5E7 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHB2Q9Y5E7 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHB2Q9Y5E7 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHB2Q9Y5E7 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHB2Q9Y5E7 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHB2Q9Y5E7 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHB2Q9Y5E7 TSPY17P-201ENST00000450329 467 ntBASIC20.92■□□□□ 0.94
PCDHB2Q9Y5E7 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.92■□□□□ 0.94
PCDHB2Q9Y5E7 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
PCDHB2Q9Y5E7 NT5C-211ENST00000582170 653 ntTSL 3 BASIC20.92■□□□□ 0.94
PCDHB2Q9Y5E7 AC010653.2-201ENST00000623505 997 ntBASIC20.92■□□□□ 0.94
PCDHB2Q9Y5E7 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHB2Q9Y5E7 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHB2Q9Y5E7 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
PCDHB2Q9Y5E7 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHB2Q9Y5E7 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
PCDHB2Q9Y5E7 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHB2Q9Y5E7 AC093484.2-201ENST00000580996 2166 ntBASIC20.92■□□□□ 0.94
PCDHB2Q9Y5E7 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
PCDHB2Q9Y5E7 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHB2Q9Y5E7 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHB2Q9Y5E7 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHB2Q9Y5E7 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHB2Q9Y5E7 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHB2Q9Y5E7 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC20.91■□□□□ 0.94
PCDHB2Q9Y5E7 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHB2Q9Y5E7 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHB2Q9Y5E7 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
PCDHB2Q9Y5E7 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHB2Q9Y5E7 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHB2Q9Y5E7 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC20.91■□□□□ 0.94
PCDHB2Q9Y5E7 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC20.91■□□□□ 0.94
PCDHB2Q9Y5E7 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHB2Q9Y5E7 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
PCDHB2Q9Y5E7 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC20.91■□□□□ 0.94
PCDHB2Q9Y5E7 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHB2Q9Y5E7 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHB2Q9Y5E7 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHB2Q9Y5E7 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC20.9■□□□□ 0.94
PCDHB2Q9Y5E7 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHB2Q9Y5E7 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
PCDHB2Q9Y5E7 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHB2Q9Y5E7 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHB2Q9Y5E7 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHB2Q9Y5E7 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.9■□□□□ 0.94
PCDHB2Q9Y5E7 BX664615.1-201ENST00000443558 458 ntBASIC20.9■□□□□ 0.94
PCDHB2Q9Y5E7 AL353719.1-201ENST00000566847 864 ntBASIC20.9■□□□□ 0.94
PCDHB2Q9Y5E7 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHB2Q9Y5E7 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
PCDHB2Q9Y5E7 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHB2Q9Y5E7 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHB2Q9Y5E7 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.9■□□□□ 0.94
PCDHB2Q9Y5E7 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC20.9■□□□□ 0.94
PCDHB2Q9Y5E7 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHB2Q9Y5E7 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.89■□□□□ 0.94
PCDHB2Q9Y5E7 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PCDHB2Q9Y5E7 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PCDHB2Q9Y5E7 KRT8P11-201ENST00000409686 1436 ntBASIC20.89■□□□□ 0.94
PCDHB2Q9Y5E7 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.89■□□□□ 0.94
PCDHB2Q9Y5E7 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.89■□□□□ 0.94
PCDHB2Q9Y5E7 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHB2Q9Y5E7 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHB2Q9Y5E7 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHB2Q9Y5E7 CA15P1-201ENST00000481698 905 ntBASIC20.89■□□□□ 0.93
PCDHB2Q9Y5E7 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
PCDHB2Q9Y5E7 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC20.89■□□□□ 0.93
PCDHB2Q9Y5E7 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHB2Q9Y5E7 GPX4-207ENST00000589115 812 ntTSL 2 BASIC20.89■□□□□ 0.93
PCDHB2Q9Y5E7 AL138966.2-201ENST00000621997 464 ntBASIC20.89■□□□□ 0.93
PCDHB2Q9Y5E7 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC20.89■□□□□ 0.93
PCDHB2Q9Y5E7 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHB2Q9Y5E7 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.89■□□□□ 0.93
PCDHB2Q9Y5E7 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHB2Q9Y5E7 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.89■□□□□ 0.93
PCDHB2Q9Y5E7 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHB2Q9Y5E7 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.88■□□□□ 0.93
PCDHB2Q9Y5E7 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHB2Q9Y5E7 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.88■□□□□ 0.93
PCDHB2Q9Y5E7 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.88■□□□□ 0.93
PCDHB2Q9Y5E7 AC104417.2-201ENST00000562989 1793 ntBASIC20.88■□□□□ 0.93
PCDHB2Q9Y5E7 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHB2Q9Y5E7 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.88■□□□□ 0.93
PCDHB2Q9Y5E7 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHB2Q9Y5E7 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHB2Q9Y5E7 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
PCDHB2Q9Y5E7 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHB2Q9Y5E7 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHB2Q9Y5E7 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.88■□□□□ 0.93
PCDHB2Q9Y5E7 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC20.88■□□□□ 0.93
PCDHB2Q9Y5E7 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHB2Q9Y5E7 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHB2Q9Y5E7 RMI2-205ENST00000576027 818 ntTSL 2 BASIC20.88■□□□□ 0.93
PCDHB2Q9Y5E7 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHB2Q9Y5E7 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
PCDHB2Q9Y5E7 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC20.88■□□□□ 0.93
PCDHB2Q9Y5E7 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHB2Q9Y5E7 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHB2Q9Y5E7 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms