Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LSM4Q9Y4Z0 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LSM4Q9Y4Z0 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LSM4Q9Y4Z0 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC15.29■□□□□ 0.04
LSM4Q9Y4Z0 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC15.29■□□□□ 0.04
LSM4Q9Y4Z0 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LSM4Q9Y4Z0 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC15.29■□□□□ 0.04
LSM4Q9Y4Z0 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LSM4Q9Y4Z0 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC15.29■□□□□ 0.04
LSM4Q9Y4Z0 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC15.29■□□□□ 0.04
LSM4Q9Y4Z0 C2orf69P4-201ENST00000565394 541 ntBASIC15.29■□□□□ 0.04
LSM4Q9Y4Z0 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC15.29■□□□□ 0.04
LSM4Q9Y4Z0 SOX15-203ENST00000570788 1093 ntBASIC15.29■□□□□ 0.04
LSM4Q9Y4Z0 AC233263.1-201ENST00000578059 224 ntBASIC15.29■□□□□ 0.04
LSM4Q9Y4Z0 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC15.29■□□□□ 0.04
LSM4Q9Y4Z0 SPIB-206ENST00000596074 847 ntTSL 2 BASIC15.29■□□□□ 0.04
LSM4Q9Y4Z0 AC073912.3-201ENST00000624414 853 ntBASIC15.29■□□□□ 0.04
LSM4Q9Y4Z0 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC15.29■□□□□ 0.04
LSM4Q9Y4Z0 USP49-202ENST00000373010 2446 ntTSL 5 BASIC15.29■□□□□ 0.04
LSM4Q9Y4Z0 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC15.29■□□□□ 0.04
LSM4Q9Y4Z0 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
LSM4Q9Y4Z0 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LSM4Q9Y4Z0 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LSM4Q9Y4Z0 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LSM4Q9Y4Z0 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LSM4Q9Y4Z0 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LSM4Q9Y4Z0 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
LSM4Q9Y4Z0 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
LSM4Q9Y4Z0 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC15.29■□□□□ 0.04
LSM4Q9Y4Z0 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LSM4Q9Y4Z0 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LSM4Q9Y4Z0 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC15.29■□□□□ 0.04
LSM4Q9Y4Z0 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
LSM4Q9Y4Z0 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LSM4Q9Y4Z0 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC15.28■□□□□ 0.04
LSM4Q9Y4Z0 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC15.28■□□□□ 0.04
LSM4Q9Y4Z0 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC15.28■□□□□ 0.04
LSM4Q9Y4Z0 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LSM4Q9Y4Z0 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LSM4Q9Y4Z0 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LSM4Q9Y4Z0 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC15.28■□□□□ 0.04
LSM4Q9Y4Z0 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LSM4Q9Y4Z0 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LSM4Q9Y4Z0 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
LSM4Q9Y4Z0 CRK-204ENST00000574295 1391 ntTSL 5 BASIC15.28■□□□□ 0.04
LSM4Q9Y4Z0 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC15.28■□□□□ 0.04
LSM4Q9Y4Z0 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LSM4Q9Y4Z0 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LSM4Q9Y4Z0 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LSM4Q9Y4Z0 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LSM4Q9Y4Z0 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LSM4Q9Y4Z0 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC15.28■□□□□ 0.04
LSM4Q9Y4Z0 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC15.28■□□□□ 0.04
LSM4Q9Y4Z0 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LSM4Q9Y4Z0 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LSM4Q9Y4Z0 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
LSM4Q9Y4Z0 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC15.28■□□□□ 0.04
LSM4Q9Y4Z0 AC069544.1-201ENST00000609399 999 ntBASIC15.28■□□□□ 0.04
LSM4Q9Y4Z0 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LSM4Q9Y4Z0 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LSM4Q9Y4Z0 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LSM4Q9Y4Z0 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC15.28■□□□□ 0.04
LSM4Q9Y4Z0 ZNF815P-204ENST00000434898 1737 ntBASIC15.28■□□□□ 0.04
LSM4Q9Y4Z0 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LSM4Q9Y4Z0 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
LSM4Q9Y4Z0 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC15.28■□□□□ 0.04
LSM4Q9Y4Z0 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LSM4Q9Y4Z0 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC15.27■□□□□ 0.04
LSM4Q9Y4Z0 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LSM4Q9Y4Z0 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC15.27■□□□□ 0.04
LSM4Q9Y4Z0 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LSM4Q9Y4Z0 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC15.27■□□□□ 0.04
LSM4Q9Y4Z0 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LSM4Q9Y4Z0 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC15.27■□□□□ 0.04
LSM4Q9Y4Z0 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LSM4Q9Y4Z0 Z98044.1-201ENST00000632503 1764 ntBASIC15.27■□□□□ 0.04
LSM4Q9Y4Z0 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC15.27■□□□□ 0.04
LSM4Q9Y4Z0 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LSM4Q9Y4Z0 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LSM4Q9Y4Z0 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LSM4Q9Y4Z0 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC15.27■□□□□ 0.04
LSM4Q9Y4Z0 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC15.27■□□□□ 0.04
LSM4Q9Y4Z0 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LSM4Q9Y4Z0 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
LSM4Q9Y4Z0 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC15.27■□□□□ 0.04
LSM4Q9Y4Z0 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
LSM4Q9Y4Z0 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC15.27■□□□□ 0.04
LSM4Q9Y4Z0 GXYLT1P3-201ENST00000453058 1193 ntBASIC15.27■□□□□ 0.04
LSM4Q9Y4Z0 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC15.27■□□□□ 0.04
LSM4Q9Y4Z0 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LSM4Q9Y4Z0 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
LSM4Q9Y4Z0 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC15.27■□□□□ 0.04
LSM4Q9Y4Z0 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC15.27■□□□□ 0.04
LSM4Q9Y4Z0 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC15.27■□□□□ 0.04
LSM4Q9Y4Z0 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC15.27■□□□□ 0.04
LSM4Q9Y4Z0 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC15.27■□□□□ 0.04
LSM4Q9Y4Z0 AL390961.4-201ENST00000623958 2535 ntBASIC15.27■□□□□ 0.03
LSM4Q9Y4Z0 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LSM4Q9Y4Z0 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LSM4Q9Y4Z0 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms