Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC21.81■■□□□ 1.08
R3HCC1Q9Y3T6 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC21.81■■□□□ 1.08
R3HCC1Q9Y3T6 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC21.81■■□□□ 1.08
R3HCC1Q9Y3T6 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC21.81■■□□□ 1.08
R3HCC1Q9Y3T6 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC21.81■■□□□ 1.08
R3HCC1Q9Y3T6 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC21.81■■□□□ 1.08
R3HCC1Q9Y3T6 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
R3HCC1Q9Y3T6 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
R3HCC1Q9Y3T6 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
R3HCC1Q9Y3T6 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
R3HCC1Q9Y3T6 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
R3HCC1Q9Y3T6 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
R3HCC1Q9Y3T6 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC21.8■■□□□ 1.08
R3HCC1Q9Y3T6 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
R3HCC1Q9Y3T6 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
R3HCC1Q9Y3T6 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
R3HCC1Q9Y3T6 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
R3HCC1Q9Y3T6 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC21.8■■□□□ 1.08
R3HCC1Q9Y3T6 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC21.8■■□□□ 1.08
R3HCC1Q9Y3T6 CD99P1-205ENST00000527459 561 ntBASIC21.8■■□□□ 1.08
R3HCC1Q9Y3T6 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC21.8■■□□□ 1.08
R3HCC1Q9Y3T6 AC083880.1-201ENST00000608266 535 ntBASIC21.8■■□□□ 1.08
R3HCC1Q9Y3T6 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
R3HCC1Q9Y3T6 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
R3HCC1Q9Y3T6 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
R3HCC1Q9Y3T6 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
R3HCC1Q9Y3T6 USP49-202ENST00000373010 2446 ntTSL 5 BASIC21.8■■□□□ 1.08
R3HCC1Q9Y3T6 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
R3HCC1Q9Y3T6 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
R3HCC1Q9Y3T6 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
R3HCC1Q9Y3T6 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
R3HCC1Q9Y3T6 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC21.8■■□□□ 1.08
R3HCC1Q9Y3T6 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
R3HCC1Q9Y3T6 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
R3HCC1Q9Y3T6 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC21.8■■□□□ 1.08
R3HCC1Q9Y3T6 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC21.8■■□□□ 1.08
R3HCC1Q9Y3T6 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
R3HCC1Q9Y3T6 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
R3HCC1Q9Y3T6 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
R3HCC1Q9Y3T6 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
R3HCC1Q9Y3T6 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC21.79■■□□□ 1.08
R3HCC1Q9Y3T6 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
R3HCC1Q9Y3T6 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
R3HCC1Q9Y3T6 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC21.79■■□□□ 1.08
R3HCC1Q9Y3T6 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
R3HCC1Q9Y3T6 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC21.79■■□□□ 1.08
R3HCC1Q9Y3T6 DENND3-207ENST00000518347 850 ntTSL 2 BASIC21.79■■□□□ 1.08
R3HCC1Q9Y3T6 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC21.79■■□□□ 1.08
R3HCC1Q9Y3T6 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC21.79■■□□□ 1.08
R3HCC1Q9Y3T6 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
R3HCC1Q9Y3T6 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
R3HCC1Q9Y3T6 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
R3HCC1Q9Y3T6 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
R3HCC1Q9Y3T6 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC21.79■■□□□ 1.08
R3HCC1Q9Y3T6 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC21.79■■□□□ 1.08
R3HCC1Q9Y3T6 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
R3HCC1Q9Y3T6 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
R3HCC1Q9Y3T6 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC21.78■■□□□ 1.08
R3HCC1Q9Y3T6 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
R3HCC1Q9Y3T6 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC21.78■■□□□ 1.08
R3HCC1Q9Y3T6 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
R3HCC1Q9Y3T6 AL390719.1-204ENST00000412397 1219 ntBASIC21.78■■□□□ 1.08
R3HCC1Q9Y3T6 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC21.78■■□□□ 1.08
R3HCC1Q9Y3T6 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC21.78■■□□□ 1.08
R3HCC1Q9Y3T6 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
R3HCC1Q9Y3T6 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
R3HCC1Q9Y3T6 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC21.78■■□□□ 1.08
R3HCC1Q9Y3T6 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
R3HCC1Q9Y3T6 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
R3HCC1Q9Y3T6 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
R3HCC1Q9Y3T6 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
R3HCC1Q9Y3T6 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
R3HCC1Q9Y3T6 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC21.77■■□□□ 1.08
R3HCC1Q9Y3T6 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
R3HCC1Q9Y3T6 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
R3HCC1Q9Y3T6 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
R3HCC1Q9Y3T6 STK25-204ENST00000405585 1643 ntTSL 2 BASIC21.77■■□□□ 1.08
R3HCC1Q9Y3T6 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC21.77■■□□□ 1.08
R3HCC1Q9Y3T6 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
R3HCC1Q9Y3T6 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
R3HCC1Q9Y3T6 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC21.77■■□□□ 1.08
R3HCC1Q9Y3T6 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC21.77■■□□□ 1.08
R3HCC1Q9Y3T6 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC21.77■■□□□ 1.08
R3HCC1Q9Y3T6 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC21.77■■□□□ 1.08
R3HCC1Q9Y3T6 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC21.77■■□□□ 1.08
R3HCC1Q9Y3T6 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
R3HCC1Q9Y3T6 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
R3HCC1Q9Y3T6 HLA-B-256ENST00000639848 1089 ntBASIC21.77■■□□□ 1.08
R3HCC1Q9Y3T6 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
R3HCC1Q9Y3T6 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
R3HCC1Q9Y3T6 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
R3HCC1Q9Y3T6 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
R3HCC1Q9Y3T6 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
R3HCC1Q9Y3T6 AC092368.3-202ENST00000574180 1591 ntBASIC21.77■■□□□ 1.08
R3HCC1Q9Y3T6 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
R3HCC1Q9Y3T6 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
R3HCC1Q9Y3T6 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC21.77■■□□□ 1.08
R3HCC1Q9Y3T6 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC21.76■■□□□ 1.07
R3HCC1Q9Y3T6 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
R3HCC1Q9Y3T6 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms