Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC24.63■■□□□ 1.53
PDZRN3Q9UPQ7 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC24.62■■□□□ 1.53
PDZRN3Q9UPQ7 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC24.62■■□□□ 1.53
PDZRN3Q9UPQ7 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PDZRN3Q9UPQ7 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PDZRN3Q9UPQ7 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC24.62■■□□□ 1.53
PDZRN3Q9UPQ7 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PDZRN3Q9UPQ7 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PDZRN3Q9UPQ7 COPE-203ENST00000351079 907 ntTSL 2 BASIC24.62■■□□□ 1.53
PDZRN3Q9UPQ7 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
PDZRN3Q9UPQ7 ISCU-203ENST00000431221 799 ntTSL 2 BASIC24.62■■□□□ 1.53
PDZRN3Q9UPQ7 AC091390.4-202ENST00000476426 537 ntBASIC24.62■■□□□ 1.53
PDZRN3Q9UPQ7 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC24.62■■□□□ 1.53
PDZRN3Q9UPQ7 AC130371.2-201ENST00000619443 611 ntBASIC24.62■■□□□ 1.53
PDZRN3Q9UPQ7 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC24.62■■□□□ 1.53
PDZRN3Q9UPQ7 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PDZRN3Q9UPQ7 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC24.62■■□□□ 1.53
PDZRN3Q9UPQ7 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC24.62■■□□□ 1.53
PDZRN3Q9UPQ7 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PDZRN3Q9UPQ7 Z82202.1-201ENST00000623446 1880 ntBASIC24.62■■□□□ 1.53
PDZRN3Q9UPQ7 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC24.62■■□□□ 1.53
PDZRN3Q9UPQ7 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC24.62■■□□□ 1.53
PDZRN3Q9UPQ7 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC24.62■■□□□ 1.53
PDZRN3Q9UPQ7 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PDZRN3Q9UPQ7 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC24.61■■□□□ 1.53
PDZRN3Q9UPQ7 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
PDZRN3Q9UPQ7 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
PDZRN3Q9UPQ7 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC24.61■■□□□ 1.53
PDZRN3Q9UPQ7 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC24.61■■□□□ 1.53
PDZRN3Q9UPQ7 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
PDZRN3Q9UPQ7 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PDZRN3Q9UPQ7 RNF152P1-201ENST00000397754 604 ntBASIC24.61■■□□□ 1.53
PDZRN3Q9UPQ7 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC24.61■■□□□ 1.53
PDZRN3Q9UPQ7 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC24.61■■□□□ 1.53
PDZRN3Q9UPQ7 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC24.61■■□□□ 1.53
PDZRN3Q9UPQ7 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
PDZRN3Q9UPQ7 KRT18P16-201ENST00000510337 1294 ntBASIC24.61■■□□□ 1.53
PDZRN3Q9UPQ7 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC24.61■■□□□ 1.53
PDZRN3Q9UPQ7 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC24.61■■□□□ 1.53
PDZRN3Q9UPQ7 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC24.61■■□□□ 1.53
PDZRN3Q9UPQ7 USF2-205ENST00000594064 1179 ntTSL 2 BASIC24.61■■□□□ 1.53
PDZRN3Q9UPQ7 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC24.61■■□□□ 1.53
PDZRN3Q9UPQ7 MED25-212ENST00000618715 1467 ntTSL 5 BASIC24.61■■□□□ 1.53
PDZRN3Q9UPQ7 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PDZRN3Q9UPQ7 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
PDZRN3Q9UPQ7 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC24.61■■□□□ 1.53
PDZRN3Q9UPQ7 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PDZRN3Q9UPQ7 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PDZRN3Q9UPQ7 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC24.61■■□□□ 1.53
PDZRN3Q9UPQ7 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
PDZRN3Q9UPQ7 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PDZRN3Q9UPQ7 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
PDZRN3Q9UPQ7 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
PDZRN3Q9UPQ7 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC24.6■■□□□ 1.53
PDZRN3Q9UPQ7 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
PDZRN3Q9UPQ7 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
PDZRN3Q9UPQ7 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC24.6■■□□□ 1.53
PDZRN3Q9UPQ7 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
PDZRN3Q9UPQ7 AL020996.1-203ENST00000536896 2307 ntBASIC24.6■■□□□ 1.53
PDZRN3Q9UPQ7 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC24.6■■□□□ 1.53
PDZRN3Q9UPQ7 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
PDZRN3Q9UPQ7 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
PDZRN3Q9UPQ7 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
PDZRN3Q9UPQ7 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
PDZRN3Q9UPQ7 AC117947.1-201ENST00000427448 529 ntBASIC24.6■■□□□ 1.53
PDZRN3Q9UPQ7 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC24.6■■□□□ 1.53
PDZRN3Q9UPQ7 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC24.6■■□□□ 1.53
PDZRN3Q9UPQ7 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC24.6■■□□□ 1.53
PDZRN3Q9UPQ7 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC24.6■■□□□ 1.53
PDZRN3Q9UPQ7 AL138966.2-201ENST00000621997 464 ntBASIC24.6■■□□□ 1.53
PDZRN3Q9UPQ7 AC116562.4-202ENST00000641738 218 ntBASIC24.6■■□□□ 1.53
PDZRN3Q9UPQ7 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
PDZRN3Q9UPQ7 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC24.6■■□□□ 1.53
PDZRN3Q9UPQ7 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
PDZRN3Q9UPQ7 PHGDH-210ENST00000641115 1638 ntBASIC24.6■■□□□ 1.53
PDZRN3Q9UPQ7 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC24.6■■□□□ 1.53
PDZRN3Q9UPQ7 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
PDZRN3Q9UPQ7 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC24.59■■□□□ 1.53
PDZRN3Q9UPQ7 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
PDZRN3Q9UPQ7 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC24.59■■□□□ 1.53
PDZRN3Q9UPQ7 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC24.59■■□□□ 1.53
PDZRN3Q9UPQ7 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
PDZRN3Q9UPQ7 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC24.59■■□□□ 1.53
PDZRN3Q9UPQ7 DBP-204ENST00000599385 709 ntTSL 3 BASIC24.59■■□□□ 1.53
PDZRN3Q9UPQ7 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
PDZRN3Q9UPQ7 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
PDZRN3Q9UPQ7 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
PDZRN3Q9UPQ7 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
PDZRN3Q9UPQ7 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC24.59■■□□□ 1.53
PDZRN3Q9UPQ7 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
PDZRN3Q9UPQ7 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
PDZRN3Q9UPQ7 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
PDZRN3Q9UPQ7 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
PDZRN3Q9UPQ7 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
PDZRN3Q9UPQ7 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC24.58■■□□□ 1.53
PDZRN3Q9UPQ7 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.53
PDZRN3Q9UPQ7 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC24.58■■□□□ 1.53
PDZRN3Q9UPQ7 AL031133.1-201ENST00000406807 723 ntBASIC24.58■■□□□ 1.53
PDZRN3Q9UPQ7 TUBB8P6-201ENST00000436895 1288 ntBASIC24.58■■□□□ 1.53
PDZRN3Q9UPQ7 CCR12P-201ENST00000446203 998 ntBASIC24.58■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms