Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC14.74□□□□□ -0.05
NOTCH3Q9UM47 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
NOTCH3Q9UM47 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
NOTCH3Q9UM47 AC091390.4-202ENST00000476426 537 ntBASIC14.74□□□□□ -0.05
NOTCH3Q9UM47 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC14.74□□□□□ -0.05
NOTCH3Q9UM47 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC14.74□□□□□ -0.05
NOTCH3Q9UM47 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NOTCH3Q9UM47 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC14.74□□□□□ -0.05
NOTCH3Q9UM47 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NOTCH3Q9UM47 DPP3P2-201ENST00000416030 1696 ntBASIC14.74□□□□□ -0.05
NOTCH3Q9UM47 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC14.74□□□□□ -0.05
NOTCH3Q9UM47 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NOTCH3Q9UM47 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NOTCH3Q9UM47 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NOTCH3Q9UM47 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NOTCH3Q9UM47 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC14.74□□□□□ -0.05
NOTCH3Q9UM47 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC14.74□□□□□ -0.05
NOTCH3Q9UM47 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
NOTCH3Q9UM47 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
NOTCH3Q9UM47 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
NOTCH3Q9UM47 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NOTCH3Q9UM47 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
NOTCH3Q9UM47 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NOTCH3Q9UM47 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC14.74□□□□□ -0.05
NOTCH3Q9UM47 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
NOTCH3Q9UM47 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC14.74□□□□□ -0.05
NOTCH3Q9UM47 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC14.74□□□□□ -0.05
NOTCH3Q9UM47 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC14.74□□□□□ -0.05
NOTCH3Q9UM47 AC011298.2-201ENST00000617989 482 ntBASIC14.74□□□□□ -0.05
NOTCH3Q9UM47 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC14.74□□□□□ -0.05
NOTCH3Q9UM47 AC131212.4-201ENST00000623606 975 ntBASIC14.74□□□□□ -0.05
NOTCH3Q9UM47 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC14.74□□□□□ -0.05
NOTCH3Q9UM47 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NOTCH3Q9UM47 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
NOTCH3Q9UM47 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NOTCH3Q9UM47 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
NOTCH3Q9UM47 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
NOTCH3Q9UM47 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
NOTCH3Q9UM47 AL049796.1-201ENST00000565336 1766 ntBASIC14.73□□□□□ -0.05
NOTCH3Q9UM47 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NOTCH3Q9UM47 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NOTCH3Q9UM47 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
NOTCH3Q9UM47 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NOTCH3Q9UM47 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
NOTCH3Q9UM47 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC14.73□□□□□ -0.05
NOTCH3Q9UM47 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC14.73□□□□□ -0.05
NOTCH3Q9UM47 GPX4-207ENST00000589115 812 ntTSL 2 BASIC14.73□□□□□ -0.05
NOTCH3Q9UM47 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
NOTCH3Q9UM47 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC14.73□□□□□ -0.05
NOTCH3Q9UM47 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC14.73□□□□□ -0.05
NOTCH3Q9UM47 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NOTCH3Q9UM47 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NOTCH3Q9UM47 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NOTCH3Q9UM47 AC073314.1-201ENST00000568729 2216 ntBASIC14.73□□□□□ -0.05
NOTCH3Q9UM47 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC14.73□□□□□ -0.05
NOTCH3Q9UM47 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
NOTCH3Q9UM47 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
NOTCH3Q9UM47 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NOTCH3Q9UM47 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC14.73□□□□□ -0.05
NOTCH3Q9UM47 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
NOTCH3Q9UM47 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
NOTCH3Q9UM47 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
NOTCH3Q9UM47 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NOTCH3Q9UM47 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
NOTCH3Q9UM47 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NOTCH3Q9UM47 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
NOTCH3Q9UM47 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC14.72□□□□□ -0.05
NOTCH3Q9UM47 CCR12P-201ENST00000446203 998 ntBASIC14.72□□□□□ -0.05
NOTCH3Q9UM47 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC14.72□□□□□ -0.05
NOTCH3Q9UM47 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
NOTCH3Q9UM47 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC14.72□□□□□ -0.05
NOTCH3Q9UM47 AC010653.2-201ENST00000623505 997 ntBASIC14.72□□□□□ -0.05
NOTCH3Q9UM47 HLA-A-209ENST00000638375 975 ntBASIC14.72□□□□□ -0.05
NOTCH3Q9UM47 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC14.72□□□□□ -0.05
NOTCH3Q9UM47 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC14.72□□□□□ -0.05
NOTCH3Q9UM47 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC14.72□□□□□ -0.05
NOTCH3Q9UM47 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NOTCH3Q9UM47 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
NOTCH3Q9UM47 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NOTCH3Q9UM47 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
NOTCH3Q9UM47 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
NOTCH3Q9UM47 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
NOTCH3Q9UM47 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC14.72□□□□□ -0.05
NOTCH3Q9UM47 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NOTCH3Q9UM47 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NOTCH3Q9UM47 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
NOTCH3Q9UM47 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
NOTCH3Q9UM47 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC14.72□□□□□ -0.05
NOTCH3Q9UM47 AL450487.1-201ENST00000426799 995 ntBASIC14.72□□□□□ -0.05
NOTCH3Q9UM47 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
NOTCH3Q9UM47 TSPY17P-201ENST00000450329 467 ntBASIC14.72□□□□□ -0.05
NOTCH3Q9UM47 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC14.72□□□□□ -0.05
NOTCH3Q9UM47 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC14.72□□□□□ -0.05
NOTCH3Q9UM47 HYMAI.1-201ENST00000620949 238 ntBASIC14.72□□□□□ -0.05
NOTCH3Q9UM47 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC14.72□□□□□ -0.05
NOTCH3Q9UM47 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NOTCH3Q9UM47 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
NOTCH3Q9UM47 FZD10-202ENST00000539839 3282 ntBASIC14.72□□□□□ -0.05
NOTCH3Q9UM47 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
NOTCH3Q9UM47 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms