Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.42■□□□□ 0.54
SPHK1Q9NYA1 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.42■□□□□ 0.54
SPHK1Q9NYA1 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
SPHK1Q9NYA1 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.42■□□□□ 0.54
SPHK1Q9NYA1 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SPHK1Q9NYA1 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SPHK1Q9NYA1 INGX-201ENST00000359239 846 ntBASIC18.42■□□□□ 0.54
SPHK1Q9NYA1 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.42■□□□□ 0.54
SPHK1Q9NYA1 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.42■□□□□ 0.54
SPHK1Q9NYA1 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.42■□□□□ 0.54
SPHK1Q9NYA1 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SPHK1Q9NYA1 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SPHK1Q9NYA1 LINC01023-201ENST00000606054 436 ntBASIC18.42■□□□□ 0.54
SPHK1Q9NYA1 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SPHK1Q9NYA1 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.42■□□□□ 0.54
SPHK1Q9NYA1 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SPHK1Q9NYA1 LINC01568-207ENST00000641790 1380 ntBASIC18.42■□□□□ 0.54
SPHK1Q9NYA1 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
SPHK1Q9NYA1 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SPHK1Q9NYA1 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SPHK1Q9NYA1 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SPHK1Q9NYA1 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SPHK1Q9NYA1 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.41■□□□□ 0.54
SPHK1Q9NYA1 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.41■□□□□ 0.54
SPHK1Q9NYA1 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.41■□□□□ 0.54
SPHK1Q9NYA1 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
SPHK1Q9NYA1 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
SPHK1Q9NYA1 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SPHK1Q9NYA1 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.41■□□□□ 0.54
SPHK1Q9NYA1 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.41■□□□□ 0.54
SPHK1Q9NYA1 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.41■□□□□ 0.54
SPHK1Q9NYA1 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.41■□□□□ 0.54
SPHK1Q9NYA1 C2orf69P3-201ENST00000565542 1120 ntBASIC18.41■□□□□ 0.54
SPHK1Q9NYA1 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
SPHK1Q9NYA1 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.41■□□□□ 0.54
SPHK1Q9NYA1 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
SPHK1Q9NYA1 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SPHK1Q9NYA1 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SPHK1Q9NYA1 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SPHK1Q9NYA1 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SPHK1Q9NYA1 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SPHK1Q9NYA1 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SPHK1Q9NYA1 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
SPHK1Q9NYA1 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
SPHK1Q9NYA1 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SPHK1Q9NYA1 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
SPHK1Q9NYA1 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SPHK1Q9NYA1 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.4■□□□□ 0.54
SPHK1Q9NYA1 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
SPHK1Q9NYA1 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SPHK1Q9NYA1 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SPHK1Q9NYA1 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SPHK1Q9NYA1 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
SPHK1Q9NYA1 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.4■□□□□ 0.54
SPHK1Q9NYA1 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.4■□□□□ 0.54
SPHK1Q9NYA1 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SPHK1Q9NYA1 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.4■□□□□ 0.54
SPHK1Q9NYA1 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.4■□□□□ 0.54
SPHK1Q9NYA1 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.4■□□□□ 0.54
SPHK1Q9NYA1 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SPHK1Q9NYA1 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.4■□□□□ 0.54
SPHK1Q9NYA1 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.4■□□□□ 0.54
SPHK1Q9NYA1 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.4■□□□□ 0.54
SPHK1Q9NYA1 AC145285.6-201ENST00000604632 637 ntBASIC18.4■□□□□ 0.54
SPHK1Q9NYA1 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SPHK1Q9NYA1 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SPHK1Q9NYA1 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
SPHK1Q9NYA1 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.4■□□□□ 0.54
SPHK1Q9NYA1 AC005332.7-201ENST00000614046 2005 ntBASIC18.4■□□□□ 0.54
SPHK1Q9NYA1 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SPHK1Q9NYA1 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
SPHK1Q9NYA1 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.4■□□□□ 0.54
SPHK1Q9NYA1 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.4■□□□□ 0.54
SPHK1Q9NYA1 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SPHK1Q9NYA1 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
SPHK1Q9NYA1 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
SPHK1Q9NYA1 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.39■□□□□ 0.54
SPHK1Q9NYA1 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
SPHK1Q9NYA1 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.39■□□□□ 0.54
SPHK1Q9NYA1 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.54
SPHK1Q9NYA1 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.54
SPHK1Q9NYA1 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
SPHK1Q9NYA1 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SPHK1Q9NYA1 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.39■□□□□ 0.53
SPHK1Q9NYA1 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.39■□□□□ 0.53
SPHK1Q9NYA1 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.39■□□□□ 0.53
SPHK1Q9NYA1 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.39■□□□□ 0.53
SPHK1Q9NYA1 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.39■□□□□ 0.53
SPHK1Q9NYA1 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.39■□□□□ 0.53
SPHK1Q9NYA1 TSPY14P-201ENST00000303979 915 ntBASIC18.39■□□□□ 0.53
SPHK1Q9NYA1 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SPHK1Q9NYA1 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SPHK1Q9NYA1 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SPHK1Q9NYA1 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.39■□□□□ 0.53
SPHK1Q9NYA1 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
SPHK1Q9NYA1 AC141586.3-201ENST00000562166 1838 ntBASIC18.39■□□□□ 0.53
SPHK1Q9NYA1 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SPHK1Q9NYA1 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SPHK1Q9NYA1 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SPHK1Q9NYA1 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms