Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
VPS45Q9NRW7 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VPS45Q9NRW7 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VPS45Q9NRW7 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
VPS45Q9NRW7 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
VPS45Q9NRW7 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.71■□□□□ 0.75
VPS45Q9NRW7 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.71■□□□□ 0.75
VPS45Q9NRW7 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VPS45Q9NRW7 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
VPS45Q9NRW7 AC116562.4-201ENST00000641316 2276 ntBASIC19.71■□□□□ 0.75
VPS45Q9NRW7 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
VPS45Q9NRW7 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
VPS45Q9NRW7 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.71■□□□□ 0.75
VPS45Q9NRW7 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
VPS45Q9NRW7 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
VPS45Q9NRW7 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
VPS45Q9NRW7 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.71■□□□□ 0.75
VPS45Q9NRW7 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.71■□□□□ 0.75
VPS45Q9NRW7 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
VPS45Q9NRW7 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.71■□□□□ 0.75
VPS45Q9NRW7 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
VPS45Q9NRW7 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
VPS45Q9NRW7 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.71■□□□□ 0.75
VPS45Q9NRW7 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
VPS45Q9NRW7 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.71■□□□□ 0.75
VPS45Q9NRW7 FSCN1P1-201ENST00000568912 1481 ntBASIC19.71■□□□□ 0.75
VPS45Q9NRW7 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.71■□□□□ 0.75
VPS45Q9NRW7 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
VPS45Q9NRW7 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VPS45Q9NRW7 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VPS45Q9NRW7 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
VPS45Q9NRW7 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VPS45Q9NRW7 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VPS45Q9NRW7 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.7■□□□□ 0.74
VPS45Q9NRW7 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VPS45Q9NRW7 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VPS45Q9NRW7 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VPS45Q9NRW7 AK4P3-201ENST00000418260 669 ntBASIC19.7■□□□□ 0.74
VPS45Q9NRW7 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.7■□□□□ 0.74
VPS45Q9NRW7 BX664615.1-201ENST00000443558 458 ntBASIC19.7■□□□□ 0.74
VPS45Q9NRW7 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.7■□□□□ 0.74
VPS45Q9NRW7 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.7■□□□□ 0.74
VPS45Q9NRW7 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.7■□□□□ 0.74
VPS45Q9NRW7 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VPS45Q9NRW7 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
VPS45Q9NRW7 ZNF815P-204ENST00000434898 1737 ntBASIC19.7■□□□□ 0.74
VPS45Q9NRW7 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.7■□□□□ 0.74
VPS45Q9NRW7 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.7■□□□□ 0.74
VPS45Q9NRW7 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
VPS45Q9NRW7 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
VPS45Q9NRW7 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.7■□□□□ 0.74
VPS45Q9NRW7 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
VPS45Q9NRW7 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
VPS45Q9NRW7 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
VPS45Q9NRW7 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
VPS45Q9NRW7 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
VPS45Q9NRW7 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
VPS45Q9NRW7 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
VPS45Q9NRW7 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
VPS45Q9NRW7 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
VPS45Q9NRW7 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
VPS45Q9NRW7 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
VPS45Q9NRW7 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
VPS45Q9NRW7 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
VPS45Q9NRW7 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.69■□□□□ 0.74
VPS45Q9NRW7 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.69■□□□□ 0.74
VPS45Q9NRW7 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
VPS45Q9NRW7 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.69■□□□□ 0.74
VPS45Q9NRW7 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.69■□□□□ 0.74
VPS45Q9NRW7 AC128688.1-201ENST00000487626 519 ntBASIC19.69■□□□□ 0.74
VPS45Q9NRW7 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
VPS45Q9NRW7 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
VPS45Q9NRW7 AC022616.7-201ENST00000525383 220 ntBASIC19.69■□□□□ 0.74
VPS45Q9NRW7 AP005242.2-201ENST00000580065 1175 ntBASIC19.69■□□□□ 0.74
VPS45Q9NRW7 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.69■□□□□ 0.74
VPS45Q9NRW7 AL358472.4-201ENST00000633140 710 ntBASIC19.69■□□□□ 0.74
VPS45Q9NRW7 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.69■□□□□ 0.74
VPS45Q9NRW7 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
VPS45Q9NRW7 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.69■□□□□ 0.74
VPS45Q9NRW7 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.69■□□□□ 0.74
VPS45Q9NRW7 AC005332.7-201ENST00000614046 2005 ntBASIC19.69■□□□□ 0.74
VPS45Q9NRW7 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
VPS45Q9NRW7 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
VPS45Q9NRW7 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
VPS45Q9NRW7 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
VPS45Q9NRW7 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.69■□□□□ 0.74
VPS45Q9NRW7 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
VPS45Q9NRW7 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
VPS45Q9NRW7 Z82202.1-201ENST00000623446 1880 ntBASIC19.69■□□□□ 0.74
VPS45Q9NRW7 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.68■□□□□ 0.74
VPS45Q9NRW7 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
VPS45Q9NRW7 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.68■□□□□ 0.74
VPS45Q9NRW7 TSPY14P-201ENST00000303979 915 ntBASIC19.68■□□□□ 0.74
VPS45Q9NRW7 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.68■□□□□ 0.74
VPS45Q9NRW7 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
VPS45Q9NRW7 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.68■□□□□ 0.74
VPS45Q9NRW7 ECEL1P2-202ENST00000465689 757 ntBASIC19.68■□□□□ 0.74
VPS45Q9NRW7 AC026271.3-201ENST00000571884 352 ntBASIC19.68■□□□□ 0.74
VPS45Q9NRW7 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.68■□□□□ 0.74
VPS45Q9NRW7 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms