Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.58■□□□□ 0.41
UBQLN4Q9NRR5 IRX1P1-201ENST00000438849 1838 ntBASIC17.58■□□□□ 0.41
UBQLN4Q9NRR5 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.58■□□□□ 0.41
UBQLN4Q9NRR5 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
UBQLN4Q9NRR5 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.41
UBQLN4Q9NRR5 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.58■□□□□ 0.41
UBQLN4Q9NRR5 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.58■□□□□ 0.41
UBQLN4Q9NRR5 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
UBQLN4Q9NRR5 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
UBQLN4Q9NRR5 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.58■□□□□ 0.4
UBQLN4Q9NRR5 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.58■□□□□ 0.4
UBQLN4Q9NRR5 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.58■□□□□ 0.4
UBQLN4Q9NRR5 MIR718-201ENST00000390190 70 ntBASIC17.58■□□□□ 0.4
UBQLN4Q9NRR5 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
UBQLN4Q9NRR5 TSPY23P-201ENST00000440136 739 ntBASIC17.58■□□□□ 0.4
UBQLN4Q9NRR5 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.58■□□□□ 0.4
UBQLN4Q9NRR5 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
UBQLN4Q9NRR5 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
UBQLN4Q9NRR5 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.58■□□□□ 0.4
UBQLN4Q9NRR5 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC17.58■□□□□ 0.4
UBQLN4Q9NRR5 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
UBQLN4Q9NRR5 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.58■□□□□ 0.4
UBQLN4Q9NRR5 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.58■□□□□ 0.4
UBQLN4Q9NRR5 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.58■□□□□ 0.4
UBQLN4Q9NRR5 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.58■□□□□ 0.4
UBQLN4Q9NRR5 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
UBQLN4Q9NRR5 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
UBQLN4Q9NRR5 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBQLN4Q9NRR5 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
UBQLN4Q9NRR5 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
UBQLN4Q9NRR5 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBQLN4Q9NRR5 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBQLN4Q9NRR5 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBQLN4Q9NRR5 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBQLN4Q9NRR5 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBQLN4Q9NRR5 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
UBQLN4Q9NRR5 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBQLN4Q9NRR5 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBQLN4Q9NRR5 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBQLN4Q9NRR5 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
UBQLN4Q9NRR5 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBQLN4Q9NRR5 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.57■□□□□ 0.4
UBQLN4Q9NRR5 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.57■□□□□ 0.4
UBQLN4Q9NRR5 AC008550.1-201ENST00000511500 884 ntBASIC17.57■□□□□ 0.4
UBQLN4Q9NRR5 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.57■□□□□ 0.4
UBQLN4Q9NRR5 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
UBQLN4Q9NRR5 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.57■□□□□ 0.4
UBQLN4Q9NRR5 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBQLN4Q9NRR5 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
UBQLN4Q9NRR5 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.57■□□□□ 0.4
UBQLN4Q9NRR5 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
UBQLN4Q9NRR5 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.57■□□□□ 0.4
UBQLN4Q9NRR5 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBQLN4Q9NRR5 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBQLN4Q9NRR5 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBQLN4Q9NRR5 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
UBQLN4Q9NRR5 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.57■□□□□ 0.4
UBQLN4Q9NRR5 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBQLN4Q9NRR5 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBQLN4Q9NRR5 FSCN1P1-201ENST00000568912 1481 ntBASIC17.56■□□□□ 0.4
UBQLN4Q9NRR5 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.56■□□□□ 0.4
UBQLN4Q9NRR5 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
UBQLN4Q9NRR5 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBQLN4Q9NRR5 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBQLN4Q9NRR5 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
UBQLN4Q9NRR5 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBQLN4Q9NRR5 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
UBQLN4Q9NRR5 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
UBQLN4Q9NRR5 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBQLN4Q9NRR5 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBQLN4Q9NRR5 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.56■□□□□ 0.4
UBQLN4Q9NRR5 AC091390.4-202ENST00000476426 537 ntBASIC17.56■□□□□ 0.4
UBQLN4Q9NRR5 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.56■□□□□ 0.4
UBQLN4Q9NRR5 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.56■□□□□ 0.4
UBQLN4Q9NRR5 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.56■□□□□ 0.4
UBQLN4Q9NRR5 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.56■□□□□ 0.4
UBQLN4Q9NRR5 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.56■□□□□ 0.4
UBQLN4Q9NRR5 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.56■□□□□ 0.4
UBQLN4Q9NRR5 Z99916.2-201ENST00000604037 246 ntBASIC17.56■□□□□ 0.4
UBQLN4Q9NRR5 MIR6786-201ENST00000616843 113 ntBASIC17.56■□□□□ 0.4
UBQLN4Q9NRR5 AC011298.2-201ENST00000617989 482 ntBASIC17.56■□□□□ 0.4
UBQLN4Q9NRR5 AC130371.2-201ENST00000619443 611 ntBASIC17.56■□□□□ 0.4
UBQLN4Q9NRR5 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
UBQLN4Q9NRR5 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBQLN4Q9NRR5 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
UBQLN4Q9NRR5 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
UBQLN4Q9NRR5 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
UBQLN4Q9NRR5 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.56■□□□□ 0.4
UBQLN4Q9NRR5 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBQLN4Q9NRR5 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.56■□□□□ 0.4
UBQLN4Q9NRR5 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.56■□□□□ 0.4
UBQLN4Q9NRR5 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.56■□□□□ 0.4
UBQLN4Q9NRR5 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.56■□□□□ 0.4
UBQLN4Q9NRR5 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBQLN4Q9NRR5 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
UBQLN4Q9NRR5 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBQLN4Q9NRR5 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBQLN4Q9NRR5 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBQLN4Q9NRR5 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.55■□□□□ 0.4
UBQLN4Q9NRR5 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms