Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PDLIM7Q9NR12 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC21.44■■□□□ 1.02
PDLIM7Q9NR12 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC21.44■■□□□ 1.02
PDLIM7Q9NR12 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PDLIM7Q9NR12 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PDLIM7Q9NR12 AP003041.3-201ENST00000527151 707 ntBASIC21.44■■□□□ 1.02
PDLIM7Q9NR12 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC21.44■■□□□ 1.02
PDLIM7Q9NR12 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC21.44■■□□□ 1.02
PDLIM7Q9NR12 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
PDLIM7Q9NR12 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC21.44■■□□□ 1.02
PDLIM7Q9NR12 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC21.44■■□□□ 1.02
PDLIM7Q9NR12 KRT8P41-201ENST00000533985 1514 ntBASIC21.44■■□□□ 1.02
PDLIM7Q9NR12 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC21.44■■□□□ 1.02
PDLIM7Q9NR12 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC21.44■■□□□ 1.02
PDLIM7Q9NR12 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
PDLIM7Q9NR12 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC21.43■■□□□ 1.02
PDLIM7Q9NR12 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21.43■■□□□ 1.02
PDLIM7Q9NR12 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC21.43■■□□□ 1.02
PDLIM7Q9NR12 PWWP2AP1-201ENST00000429776 2273 ntBASIC21.43■■□□□ 1.02
PDLIM7Q9NR12 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PDLIM7Q9NR12 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC21.43■■□□□ 1.02
PDLIM7Q9NR12 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PDLIM7Q9NR12 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PDLIM7Q9NR12 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC21.43■■□□□ 1.02
PDLIM7Q9NR12 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC21.43■■□□□ 1.02
PDLIM7Q9NR12 HYMAI.1-201ENST00000620949 238 ntBASIC21.43■■□□□ 1.02
PDLIM7Q9NR12 KRT8P45-201ENST00000414328 1447 ntBASIC21.43■■□□□ 1.02
PDLIM7Q9NR12 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PDLIM7Q9NR12 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
PDLIM7Q9NR12 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PDLIM7Q9NR12 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC21.43■■□□□ 1.02
PDLIM7Q9NR12 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
PDLIM7Q9NR12 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC21.43■■□□□ 1.02
PDLIM7Q9NR12 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PDLIM7Q9NR12 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PDLIM7Q9NR12 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PDLIM7Q9NR12 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PDLIM7Q9NR12 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
PDLIM7Q9NR12 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.42■■□□□ 1.02
PDLIM7Q9NR12 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PDLIM7Q9NR12 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC21.42■■□□□ 1.02
PDLIM7Q9NR12 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC21.42■■□□□ 1.02
PDLIM7Q9NR12 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC21.42■■□□□ 1.02
PDLIM7Q9NR12 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PDLIM7Q9NR12 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PDLIM7Q9NR12 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC21.41■■□□□ 1.02
PDLIM7Q9NR12 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.41■■□□□ 1.02
PDLIM7Q9NR12 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PDLIM7Q9NR12 ZNF815P-204ENST00000434898 1737 ntBASIC21.41■■□□□ 1.02
PDLIM7Q9NR12 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC21.41■■□□□ 1.02
PDLIM7Q9NR12 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PDLIM7Q9NR12 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PDLIM7Q9NR12 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.41■■□□□ 1.02
PDLIM7Q9NR12 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
PDLIM7Q9NR12 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC21.41■■□□□ 1.02
PDLIM7Q9NR12 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC21.41■■□□□ 1.02
PDLIM7Q9NR12 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC21.41■■□□□ 1.02
PDLIM7Q9NR12 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC21.41■■□□□ 1.02
PDLIM7Q9NR12 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC21.41■■□□□ 1.02
PDLIM7Q9NR12 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC21.41■■□□□ 1.02
PDLIM7Q9NR12 KLK8-205ENST00000593490 267 ntTSL 3 BASIC21.41■■□□□ 1.02
PDLIM7Q9NR12 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC21.41■■□□□ 1.02
PDLIM7Q9NR12 BCL10-202ENST00000620248 774 ntTSL 5 BASIC21.41■■□□□ 1.02
PDLIM7Q9NR12 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PDLIM7Q9NR12 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PDLIM7Q9NR12 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PDLIM7Q9NR12 ADM-207ENST00000530439 1839 ntTSL 2 BASIC21.41■■□□□ 1.02
PDLIM7Q9NR12 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
PDLIM7Q9NR12 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC21.41■■□□□ 1.02
PDLIM7Q9NR12 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PDLIM7Q9NR12 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PDLIM7Q9NR12 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
PDLIM7Q9NR12 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PDLIM7Q9NR12 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC21.4■■□□□ 1.02
PDLIM7Q9NR12 LY6E-213ENST00000522528 606 ntTSL 3 BASIC21.4■■□□□ 1.02
PDLIM7Q9NR12 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.4■■□□□ 1.02
PDLIM7Q9NR12 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
PDLIM7Q9NR12 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
PDLIM7Q9NR12 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC21.4■■□□□ 1.02
PDLIM7Q9NR12 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PDLIM7Q9NR12 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC21.4■■□□□ 1.02
PDLIM7Q9NR12 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
PDLIM7Q9NR12 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC21.39■■□□□ 1.02
PDLIM7Q9NR12 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC21.39■■□□□ 1.01
PDLIM7Q9NR12 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PDLIM7Q9NR12 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
PDLIM7Q9NR12 Telomerase-vert.1-201ENST00000363312 438 ntBASIC21.39■■□□□ 1.01
PDLIM7Q9NR12 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PDLIM7Q9NR12 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PDLIM7Q9NR12 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PDLIM7Q9NR12 PVRIG2P-201ENST00000435460 978 ntBASIC21.39■■□□□ 1.01
PDLIM7Q9NR12 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC21.39■■□□□ 1.01
PDLIM7Q9NR12 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC21.39■■□□□ 1.01
PDLIM7Q9NR12 NPAP1P7-201ENST00000613027 823 ntBASIC21.39■■□□□ 1.01
PDLIM7Q9NR12 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
PDLIM7Q9NR12 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC21.39■■□□□ 1.01
PDLIM7Q9NR12 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PDLIM7Q9NR12 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.39■■□□□ 1.01
PDLIM7Q9NR12 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PDLIM7Q9NR12 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms