Protein–RNA interactions for Protein: Q9H8M2

BRD9, Bromodomain-containing protein 9, humanhuman

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9Q9H8M2 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
BRD9Q9H8M2 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
BRD9Q9H8M2 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
BRD9Q9H8M2 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
BRD9Q9H8M2 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
BRD9Q9H8M2 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
BRD9Q9H8M2 AL450487.1-201ENST00000426799 995 ntBASIC19.74■□□□□ 0.75
BRD9Q9H8M2 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.74■□□□□ 0.75
BRD9Q9H8M2 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC19.74■□□□□ 0.75
BRD9Q9H8M2 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19.74■□□□□ 0.75
BRD9Q9H8M2 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
BRD9Q9H8M2 ZNF444P1-201ENST00000559497 298 ntBASIC19.74■□□□□ 0.75
BRD9Q9H8M2 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.74■□□□□ 0.75
BRD9Q9H8M2 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
BRD9Q9H8M2 NDUFV2-AS1-203ENST00000608008 779 ntBASIC19.74■□□□□ 0.75
BRD9Q9H8M2 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
BRD9Q9H8M2 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
BRD9Q9H8M2 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
BRD9Q9H8M2 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
BRD9Q9H8M2 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
BRD9Q9H8M2 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.74■□□□□ 0.75
BRD9Q9H8M2 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
BRD9Q9H8M2 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
BRD9Q9H8M2 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
BRD9Q9H8M2 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.73■□□□□ 0.75
BRD9Q9H8M2 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.73■□□□□ 0.75
BRD9Q9H8M2 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
BRD9Q9H8M2 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.73■□□□□ 0.75
BRD9Q9H8M2 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
BRD9Q9H8M2 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
BRD9Q9H8M2 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
BRD9Q9H8M2 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC19.73■□□□□ 0.75
BRD9Q9H8M2 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC19.73■□□□□ 0.75
BRD9Q9H8M2 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC19.73■□□□□ 0.75
BRD9Q9H8M2 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.73■□□□□ 0.75
BRD9Q9H8M2 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
BRD9Q9H8M2 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
BRD9Q9H8M2 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
BRD9Q9H8M2 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
BRD9Q9H8M2 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
BRD9Q9H8M2 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
BRD9Q9H8M2 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
BRD9Q9H8M2 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.72■□□□□ 0.75
BRD9Q9H8M2 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
BRD9Q9H8M2 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
BRD9Q9H8M2 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
BRD9Q9H8M2 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
BRD9Q9H8M2 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
BRD9Q9H8M2 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
BRD9Q9H8M2 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.72■□□□□ 0.75
BRD9Q9H8M2 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
BRD9Q9H8M2 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
BRD9Q9H8M2 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
BRD9Q9H8M2 STARP1-201ENST00000397973 869 ntBASIC19.72■□□□□ 0.75
BRD9Q9H8M2 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC19.72■□□□□ 0.75
BRD9Q9H8M2 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
BRD9Q9H8M2 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.72■□□□□ 0.75
BRD9Q9H8M2 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
BRD9Q9H8M2 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
BRD9Q9H8M2 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.72■□□□□ 0.75
BRD9Q9H8M2 AC083849.1-201ENST00000615227 514 ntBASIC19.72■□□□□ 0.75
BRD9Q9H8M2 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC19.72■□□□□ 0.75
BRD9Q9H8M2 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.72■□□□□ 0.75
BRD9Q9H8M2 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
BRD9Q9H8M2 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
BRD9Q9H8M2 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
BRD9Q9H8M2 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
BRD9Q9H8M2 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
BRD9Q9H8M2 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.71■□□□□ 0.75
BRD9Q9H8M2 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
BRD9Q9H8M2 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
BRD9Q9H8M2 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
BRD9Q9H8M2 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.71■□□□□ 0.75
BRD9Q9H8M2 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
BRD9Q9H8M2 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
BRD9Q9H8M2 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
BRD9Q9H8M2 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.71■□□□□ 0.75
BRD9Q9H8M2 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
BRD9Q9H8M2 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
BRD9Q9H8M2 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
BRD9Q9H8M2 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
BRD9Q9H8M2 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC19.71■□□□□ 0.75
BRD9Q9H8M2 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.71■□□□□ 0.75
BRD9Q9H8M2 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.71■□□□□ 0.75
BRD9Q9H8M2 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.71■□□□□ 0.75
BRD9Q9H8M2 GCSHP2-201ENST00000560971 527 ntBASIC19.71■□□□□ 0.75
BRD9Q9H8M2 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.71■□□□□ 0.75
BRD9Q9H8M2 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC19.71■□□□□ 0.75
BRD9Q9H8M2 CLEC4GP1-201ENST00000596555 870 ntBASIC19.71■□□□□ 0.75
BRD9Q9H8M2 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.71■□□□□ 0.75
BRD9Q9H8M2 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.71■□□□□ 0.75
BRD9Q9H8M2 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.71■□□□□ 0.75
BRD9Q9H8M2 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
BRD9Q9H8M2 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
BRD9Q9H8M2 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
BRD9Q9H8M2 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
BRD9Q9H8M2 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
BRD9Q9H8M2 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.71■□□□□ 0.74
BRD9Q9H8M2 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
BRD9Q9H8M2 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms