Protein–RNA interactions for Protein: Q9H6J7

C11orf49, UPF0705 protein C11orf49, humanhuman

Predictions only

Length 331 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf49Q9H6J7 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC21■□□□□ 0.95
C11orf49Q9H6J7 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
C11orf49Q9H6J7 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC21■□□□□ 0.95
C11orf49Q9H6J7 AP001005.1-201ENST00000571755 1248 ntBASIC21■□□□□ 0.95
C11orf49Q9H6J7 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC21■□□□□ 0.95
C11orf49Q9H6J7 MIR3180-5-201ENST00000583743 153 ntBASIC21■□□□□ 0.95
C11orf49Q9H6J7 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC21■□□□□ 0.95
C11orf49Q9H6J7 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC21■□□□□ 0.95
C11orf49Q9H6J7 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21■□□□□ 0.95
C11orf49Q9H6J7 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21■□□□□ 0.95
C11orf49Q9H6J7 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
C11orf49Q9H6J7 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC21■□□□□ 0.95
C11orf49Q9H6J7 Z83836.1-201ENST00000624605 1642 ntBASIC21■□□□□ 0.95
C11orf49Q9H6J7 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
C11orf49Q9H6J7 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
C11orf49Q9H6J7 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
C11orf49Q9H6J7 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
C11orf49Q9H6J7 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
C11orf49Q9H6J7 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.99■□□□□ 0.95
C11orf49Q9H6J7 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
C11orf49Q9H6J7 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
C11orf49Q9H6J7 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
C11orf49Q9H6J7 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
C11orf49Q9H6J7 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
C11orf49Q9H6J7 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
C11orf49Q9H6J7 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
C11orf49Q9H6J7 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC20.99■□□□□ 0.95
C11orf49Q9H6J7 PPIE-208ENST00000470213 927 ntTSL 3 BASIC20.99■□□□□ 0.95
C11orf49Q9H6J7 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
C11orf49Q9H6J7 IGHV3-41-201ENST00000613121 348 ntBASIC20.99■□□□□ 0.95
C11orf49Q9H6J7 AC112497.1-201ENST00000624824 639 ntBASIC20.99■□□□□ 0.95
C11orf49Q9H6J7 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC20.99■□□□□ 0.95
C11orf49Q9H6J7 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
C11orf49Q9H6J7 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
C11orf49Q9H6J7 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
C11orf49Q9H6J7 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
C11orf49Q9H6J7 AF106564.1-201ENST00000607058 2553 ntBASIC20.98■□□□□ 0.95
C11orf49Q9H6J7 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
C11orf49Q9H6J7 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
C11orf49Q9H6J7 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
C11orf49Q9H6J7 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC20.98■□□□□ 0.95
C11orf49Q9H6J7 SAPCD2P3-201ENST00000455031 850 ntBASIC20.98■□□□□ 0.95
C11orf49Q9H6J7 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC20.98■□□□□ 0.95
C11orf49Q9H6J7 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
C11orf49Q9H6J7 ABR-204ENST00000543210 1049 ntTSL 2 BASIC20.98■□□□□ 0.95
C11orf49Q9H6J7 Z69720.1-201ENST00000601483 472 ntBASIC20.98■□□□□ 0.95
C11orf49Q9H6J7 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC20.98■□□□□ 0.95
C11orf49Q9H6J7 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
C11orf49Q9H6J7 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
C11orf49Q9H6J7 AC233702.3-201ENST00000578656 1387 ntBASIC20.97■□□□□ 0.95
C11orf49Q9H6J7 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
C11orf49Q9H6J7 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
C11orf49Q9H6J7 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
C11orf49Q9H6J7 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
C11orf49Q9H6J7 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
C11orf49Q9H6J7 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC20.97■□□□□ 0.95
C11orf49Q9H6J7 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC20.97■□□□□ 0.95
C11orf49Q9H6J7 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.97■□□□□ 0.95
C11orf49Q9H6J7 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC20.97■□□□□ 0.95
C11orf49Q9H6J7 MCCD1P1-208ENST00000445732 328 ntBASIC20.97■□□□□ 0.95
C11orf49Q9H6J7 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC20.97■□□□□ 0.95
C11orf49Q9H6J7 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC20.97■□□□□ 0.95
C11orf49Q9H6J7 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC20.97■□□□□ 0.95
C11orf49Q9H6J7 KRT18P58-201ENST00000527480 1120 ntBASIC20.97■□□□□ 0.95
C11orf49Q9H6J7 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC20.97■□□□□ 0.95
C11orf49Q9H6J7 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC20.97■□□□□ 0.95
C11orf49Q9H6J7 LITAF-220ENST00000620789 692 ntTSL 5 BASIC20.97■□□□□ 0.95
C11orf49Q9H6J7 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
C11orf49Q9H6J7 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
C11orf49Q9H6J7 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
C11orf49Q9H6J7 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
C11orf49Q9H6J7 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
C11orf49Q9H6J7 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC20.97■□□□□ 0.95
C11orf49Q9H6J7 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
C11orf49Q9H6J7 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
C11orf49Q9H6J7 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
C11orf49Q9H6J7 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
C11orf49Q9H6J7 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
C11orf49Q9H6J7 TLE1-202ENST00000376484 666 ntTSL 3 BASIC20.96■□□□□ 0.95
C11orf49Q9H6J7 FAM220CP-201ENST00000395253 831 ntBASIC20.96■□□□□ 0.95
C11orf49Q9H6J7 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC20.96■□□□□ 0.95
C11orf49Q9H6J7 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC20.96■□□□□ 0.95
C11orf49Q9H6J7 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
C11orf49Q9H6J7 SLC25A1P1-201ENST00000528351 927 ntBASIC20.96■□□□□ 0.95
C11orf49Q9H6J7 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
C11orf49Q9H6J7 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
C11orf49Q9H6J7 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.96■□□□□ 0.95
C11orf49Q9H6J7 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.96■□□□□ 0.95
C11orf49Q9H6J7 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
C11orf49Q9H6J7 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
C11orf49Q9H6J7 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
C11orf49Q9H6J7 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
C11orf49Q9H6J7 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
C11orf49Q9H6J7 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.95■□□□□ 0.94
C11orf49Q9H6J7 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
C11orf49Q9H6J7 RNA5SP419-201ENST00000515908 135 ntBASIC20.95■□□□□ 0.94
C11orf49Q9H6J7 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
C11orf49Q9H6J7 MOK-208ENST00000519058 917 ntTSL 2 BASIC20.95■□□□□ 0.94
C11orf49Q9H6J7 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC20.95■□□□□ 0.94
C11orf49Q9H6J7 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms