Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VPS11Q9H270 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.22■□□□□ 0.67
VPS11Q9H270 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
VPS11Q9H270 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.22■□□□□ 0.67
VPS11Q9H270 CROCCP5-201ENST00000436658 830 ntBASIC19.22■□□□□ 0.67
VPS11Q9H270 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
VPS11Q9H270 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.22■□□□□ 0.67
VPS11Q9H270 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
VPS11Q9H270 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VPS11Q9H270 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.22■□□□□ 0.67
VPS11Q9H270 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
VPS11Q9H270 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.22■□□□□ 0.67
VPS11Q9H270 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
VPS11Q9H270 AL354751.1-201ENST00000412768 1863 ntBASIC19.22■□□□□ 0.67
VPS11Q9H270 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VPS11Q9H270 SDHAP1-207ENST00000440850 2000 ntBASIC19.22■□□□□ 0.67
VPS11Q9H270 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
VPS11Q9H270 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
VPS11Q9H270 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VPS11Q9H270 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.22■□□□□ 0.67
VPS11Q9H270 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VPS11Q9H270 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.21■□□□□ 0.67
VPS11Q9H270 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VPS11Q9H270 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VPS11Q9H270 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.21■□□□□ 0.67
VPS11Q9H270 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VPS11Q9H270 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.21■□□□□ 0.67
VPS11Q9H270 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VPS11Q9H270 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
VPS11Q9H270 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VPS11Q9H270 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
VPS11Q9H270 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VPS11Q9H270 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VPS11Q9H270 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VPS11Q9H270 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
VPS11Q9H270 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.21■□□□□ 0.67
VPS11Q9H270 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.21■□□□□ 0.67
VPS11Q9H270 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
VPS11Q9H270 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.21■□□□□ 0.67
VPS11Q9H270 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
VPS11Q9H270 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.21■□□□□ 0.67
VPS11Q9H270 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
VPS11Q9H270 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
VPS11Q9H270 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.21■□□□□ 0.67
VPS11Q9H270 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
VPS11Q9H270 AL137784.2-201ENST00000607332 1000 ntBASIC19.21■□□□□ 0.67
VPS11Q9H270 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VPS11Q9H270 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
VPS11Q9H270 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
VPS11Q9H270 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.21■□□□□ 0.67
VPS11Q9H270 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
VPS11Q9H270 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.21■□□□□ 0.67
VPS11Q9H270 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
VPS11Q9H270 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.21■□□□□ 0.67
VPS11Q9H270 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
VPS11Q9H270 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VPS11Q9H270 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.21■□□□□ 0.67
VPS11Q9H270 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
VPS11Q9H270 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
VPS11Q9H270 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
VPS11Q9H270 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VPS11Q9H270 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.2■□□□□ 0.66
VPS11Q9H270 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
VPS11Q9H270 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VPS11Q9H270 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
VPS11Q9H270 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VPS11Q9H270 AC104417.2-201ENST00000562989 1793 ntBASIC19.2■□□□□ 0.66
VPS11Q9H270 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VPS11Q9H270 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.2■□□□□ 0.66
VPS11Q9H270 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
VPS11Q9H270 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.2■□□□□ 0.66
VPS11Q9H270 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.2■□□□□ 0.66
VPS11Q9H270 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.2■□□□□ 0.66
VPS11Q9H270 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.2■□□□□ 0.66
VPS11Q9H270 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.2■□□□□ 0.66
VPS11Q9H270 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VPS11Q9H270 AL512353.2-201ENST00000448759 1962 ntBASIC19.2■□□□□ 0.66
VPS11Q9H270 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.2■□□□□ 0.66
VPS11Q9H270 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
VPS11Q9H270 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
VPS11Q9H270 AP006587.1-201ENST00000534129 1502 ntBASIC19.2■□□□□ 0.66
VPS11Q9H270 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
VPS11Q9H270 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.19■□□□□ 0.66
VPS11Q9H270 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.19■□□□□ 0.66
VPS11Q9H270 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
VPS11Q9H270 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.19■□□□□ 0.66
VPS11Q9H270 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
VPS11Q9H270 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
VPS11Q9H270 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.19■□□□□ 0.66
VPS11Q9H270 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VPS11Q9H270 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
VPS11Q9H270 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VPS11Q9H270 NOC2LP1-202ENST00000452600 2235 ntBASIC19.19■□□□□ 0.66
VPS11Q9H270 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VPS11Q9H270 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
VPS11Q9H270 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.19■□□□□ 0.66
VPS11Q9H270 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.19■□□□□ 0.66
VPS11Q9H270 AC083906.2-201ENST00000511578 360 ntBASIC19.19■□□□□ 0.66
VPS11Q9H270 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
VPS11Q9H270 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms