Protein–RNA interactions for Protein: Q9BRF8

CPPED1, Serine/threonine-protein phosphatase CPPED1, humanhuman

Predicted RBP Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPPED1Q9BRF8 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.98■□□□□ 0.47
CPPED1Q9BRF8 KLF2-202ENST00000592003 564 ntTSL 3 BASIC17.98■□□□□ 0.47
CPPED1Q9BRF8 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.98■□□□□ 0.47
CPPED1Q9BRF8 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.98■□□□□ 0.47
CPPED1Q9BRF8 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.98■□□□□ 0.47
CPPED1Q9BRF8 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.98■□□□□ 0.47
CPPED1Q9BRF8 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CPPED1Q9BRF8 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
CPPED1Q9BRF8 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CPPED1Q9BRF8 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CPPED1Q9BRF8 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
CPPED1Q9BRF8 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.98■□□□□ 0.47
CPPED1Q9BRF8 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CPPED1Q9BRF8 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CPPED1Q9BRF8 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CPPED1Q9BRF8 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
CPPED1Q9BRF8 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
CPPED1Q9BRF8 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
CPPED1Q9BRF8 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CPPED1Q9BRF8 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CPPED1Q9BRF8 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CPPED1Q9BRF8 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CPPED1Q9BRF8 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.97■□□□□ 0.47
CPPED1Q9BRF8 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CPPED1Q9BRF8 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
CPPED1Q9BRF8 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CPPED1Q9BRF8 TSPY6P-201ENST00000448518 926 ntBASIC17.97■□□□□ 0.47
CPPED1Q9BRF8 AC097658.1-201ENST00000475555 843 ntBASIC17.97■□□□□ 0.47
CPPED1Q9BRF8 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.97■□□□□ 0.47
CPPED1Q9BRF8 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CPPED1Q9BRF8 MIR4758-201ENST00000577688 71 ntBASIC17.97■□□□□ 0.47
CPPED1Q9BRF8 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC17.97■□□□□ 0.47
CPPED1Q9BRF8 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.97■□□□□ 0.47
CPPED1Q9BRF8 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.97■□□□□ 0.47
CPPED1Q9BRF8 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CPPED1Q9BRF8 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CPPED1Q9BRF8 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CPPED1Q9BRF8 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CPPED1Q9BRF8 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.97■□□□□ 0.47
CPPED1Q9BRF8 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CPPED1Q9BRF8 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CPPED1Q9BRF8 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
CPPED1Q9BRF8 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CPPED1Q9BRF8 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
CPPED1Q9BRF8 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.96■□□□□ 0.47
CPPED1Q9BRF8 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CPPED1Q9BRF8 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CPPED1Q9BRF8 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CPPED1Q9BRF8 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CPPED1Q9BRF8 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CPPED1Q9BRF8 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CPPED1Q9BRF8 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CPPED1Q9BRF8 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CPPED1Q9BRF8 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CPPED1Q9BRF8 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CPPED1Q9BRF8 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CPPED1Q9BRF8 SLC29A4P1-201ENST00000398760 971 ntBASIC17.96■□□□□ 0.47
CPPED1Q9BRF8 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.96■□□□□ 0.47
CPPED1Q9BRF8 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.96■□□□□ 0.47
CPPED1Q9BRF8 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.96■□□□□ 0.47
CPPED1Q9BRF8 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.96■□□□□ 0.47
CPPED1Q9BRF8 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC17.96■□□□□ 0.47
CPPED1Q9BRF8 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CPPED1Q9BRF8 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CPPED1Q9BRF8 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CPPED1Q9BRF8 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CPPED1Q9BRF8 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CPPED1Q9BRF8 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CPPED1Q9BRF8 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.96■□□□□ 0.47
CPPED1Q9BRF8 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
CPPED1Q9BRF8 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CPPED1Q9BRF8 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CPPED1Q9BRF8 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CPPED1Q9BRF8 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.96■□□□□ 0.47
CPPED1Q9BRF8 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CPPED1Q9BRF8 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.96■□□□□ 0.47
CPPED1Q9BRF8 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CPPED1Q9BRF8 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
CPPED1Q9BRF8 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
CPPED1Q9BRF8 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.96■□□□□ 0.46
CPPED1Q9BRF8 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CPPED1Q9BRF8 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.95■□□□□ 0.46
CPPED1Q9BRF8 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CPPED1Q9BRF8 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CPPED1Q9BRF8 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CPPED1Q9BRF8 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CPPED1Q9BRF8 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.95■□□□□ 0.46
CPPED1Q9BRF8 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CPPED1Q9BRF8 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CPPED1Q9BRF8 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CPPED1Q9BRF8 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.95■□□□□ 0.46
CPPED1Q9BRF8 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CPPED1Q9BRF8 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CPPED1Q9BRF8 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CPPED1Q9BRF8 AC098934.4-201ENST00000564127 592 ntBASIC17.95■□□□□ 0.46
CPPED1Q9BRF8 SOX15-203ENST00000570788 1093 ntBASIC17.95■□□□□ 0.46
CPPED1Q9BRF8 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC17.95■□□□□ 0.46
CPPED1Q9BRF8 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CPPED1Q9BRF8 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.95■□□□□ 0.46
CPPED1Q9BRF8 AC083880.1-201ENST00000608266 535 ntBASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms