Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
CDCA3Q99618 AL157888.1-201ENST00000631930 593 ntBASIC19.91■□□□□ 0.78
CDCA3Q99618 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
CDCA3Q99618 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDCA3Q99618 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC19.91■□□□□ 0.78
CDCA3Q99618 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CDCA3Q99618 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDCA3Q99618 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CDCA3Q99618 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CDCA3Q99618 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDCA3Q99618 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
CDCA3Q99618 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.91■□□□□ 0.78
CDCA3Q99618 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.9■□□□□ 0.78
CDCA3Q99618 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDCA3Q99618 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CDCA3Q99618 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CDCA3Q99618 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDCA3Q99618 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDCA3Q99618 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
CDCA3Q99618 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDCA3Q99618 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDCA3Q99618 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDCA3Q99618 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.9■□□□□ 0.78
CDCA3Q99618 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDCA3Q99618 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC19.9■□□□□ 0.78
CDCA3Q99618 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.9■□□□□ 0.78
CDCA3Q99618 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
CDCA3Q99618 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDCA3Q99618 CIB2-208ENST00000560618 804 ntTSL 2 BASIC19.9■□□□□ 0.78
CDCA3Q99618 AC104692.2-201ENST00000603054 253 ntBASIC19.9■□□□□ 0.78
CDCA3Q99618 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDCA3Q99618 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDCA3Q99618 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDCA3Q99618 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDCA3Q99618 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDCA3Q99618 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDCA3Q99618 BAALC-202ENST00000306391 243 ntTSL 5 BASIC19.89■□□□□ 0.77
CDCA3Q99618 BAALC-204ENST00000330955 222 ntTSL 5 BASIC19.89■□□□□ 0.77
CDCA3Q99618 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDCA3Q99618 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CDCA3Q99618 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDCA3Q99618 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CDCA3Q99618 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDCA3Q99618 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDCA3Q99618 LINC00265-3P-201ENST00000447588 903 ntBASIC19.89■□□□□ 0.77
CDCA3Q99618 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.89■□□□□ 0.77
CDCA3Q99618 AC009078.2-202ENST00000463353 338 ntBASIC19.89■□□□□ 0.77
CDCA3Q99618 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
CDCA3Q99618 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDCA3Q99618 AP000867.3-201ENST00000524675 377 ntBASIC19.89■□□□□ 0.77
CDCA3Q99618 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDCA3Q99618 PNN-202ENST00000553331 656 ntTSL 3 BASIC19.89■□□□□ 0.77
CDCA3Q99618 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CDCA3Q99618 AL732292.2-201ENST00000609649 430 ntBASIC19.89■□□□□ 0.77
CDCA3Q99618 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.89■□□□□ 0.77
CDCA3Q99618 GPALPP1-207ENST00000611650 899 ntBASIC19.89■□□□□ 0.77
CDCA3Q99618 AL031008.1-201ENST00000619963 541 ntBASIC19.89■□□□□ 0.77
CDCA3Q99618 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
CDCA3Q99618 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CDCA3Q99618 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDCA3Q99618 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.88■□□□□ 0.77
CDCA3Q99618 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDCA3Q99618 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDCA3Q99618 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDCA3Q99618 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CDCA3Q99618 KRT8P3-201ENST00000519669 1449 ntBASIC19.88■□□□□ 0.77
CDCA3Q99618 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC19.88■□□□□ 0.77
CDCA3Q99618 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
CDCA3Q99618 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CDCA3Q99618 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDCA3Q99618 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDCA3Q99618 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CDCA3Q99618 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC19.88■□□□□ 0.77
CDCA3Q99618 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC19.88■□□□□ 0.77
CDCA3Q99618 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
CDCA3Q99618 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDCA3Q99618 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDCA3Q99618 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDCA3Q99618 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CDCA3Q99618 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDCA3Q99618 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CDCA3Q99618 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDCA3Q99618 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDCA3Q99618 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.87■□□□□ 0.77
CDCA3Q99618 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDCA3Q99618 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.87■□□□□ 0.77
CDCA3Q99618 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CDCA3Q99618 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
CDCA3Q99618 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CDCA3Q99618 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDCA3Q99618 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDCA3Q99618 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC19.87■□□□□ 0.77
CDCA3Q99618 AL022342.1-201ENST00000400363 863 ntBASIC19.87■□□□□ 0.77
CDCA3Q99618 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC19.87■□□□□ 0.77
CDCA3Q99618 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC19.87■□□□□ 0.77
CDCA3Q99618 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CDCA3Q99618 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.87■□□□□ 0.77
CDCA3Q99618 AC023511.2-201ENST00000618803 211 ntBASIC19.87■□□□□ 0.77
CDCA3Q99618 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CDCA3Q99618 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms