Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.01■□□□□ 0.47
NR1H4Q96RI1 AC126544.1-201ENST00000580842 1059 ntBASIC18.01■□□□□ 0.47
NR1H4Q96RI1 AL136162.1-201ENST00000607711 1078 ntBASIC18.01■□□□□ 0.47
NR1H4Q96RI1 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.01■□□□□ 0.47
NR1H4Q96RI1 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NR1H4Q96RI1 LTF-203ENST00000426532 2494 ntTSL 2 BASIC18.01■□□□□ 0.47
NR1H4Q96RI1 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NR1H4Q96RI1 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NR1H4Q96RI1 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NR1H4Q96RI1 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
NR1H4Q96RI1 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NR1H4Q96RI1 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NR1H4Q96RI1 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
NR1H4Q96RI1 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NR1H4Q96RI1 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC18■□□□□ 0.47
NR1H4Q96RI1 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC18■□□□□ 0.47
NR1H4Q96RI1 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
NR1H4Q96RI1 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC18■□□□□ 0.47
NR1H4Q96RI1 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NR1H4Q96RI1 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
NR1H4Q96RI1 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NR1H4Q96RI1 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NR1H4Q96RI1 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NR1H4Q96RI1 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18■□□□□ 0.47
NR1H4Q96RI1 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18■□□□□ 0.47
NR1H4Q96RI1 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NR1H4Q96RI1 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC18■□□□□ 0.47
NR1H4Q96RI1 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18■□□□□ 0.47
NR1H4Q96RI1 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC18■□□□□ 0.47
NR1H4Q96RI1 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC18■□□□□ 0.47
NR1H4Q96RI1 AC024257.2-201ENST00000549699 147 ntBASIC18■□□□□ 0.47
NR1H4Q96RI1 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NR1H4Q96RI1 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NR1H4Q96RI1 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NR1H4Q96RI1 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
NR1H4Q96RI1 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
NR1H4Q96RI1 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NR1H4Q96RI1 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NR1H4Q96RI1 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC18■□□□□ 0.47
NR1H4Q96RI1 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
NR1H4Q96RI1 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.99■□□□□ 0.47
NR1H4Q96RI1 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.99■□□□□ 0.47
NR1H4Q96RI1 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC17.99■□□□□ 0.47
NR1H4Q96RI1 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC17.99■□□□□ 0.47
NR1H4Q96RI1 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
NR1H4Q96RI1 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
NR1H4Q96RI1 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
NR1H4Q96RI1 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NR1H4Q96RI1 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NR1H4Q96RI1 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
NR1H4Q96RI1 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NR1H4Q96RI1 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NR1H4Q96RI1 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
NR1H4Q96RI1 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NR1H4Q96RI1 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
NR1H4Q96RI1 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
NR1H4Q96RI1 BX842568.3-201ENST00000418104 571 ntBASIC17.99■□□□□ 0.47
NR1H4Q96RI1 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC17.99■□□□□ 0.47
NR1H4Q96RI1 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
NR1H4Q96RI1 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC17.99■□□□□ 0.47
NR1H4Q96RI1 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC17.99■□□□□ 0.47
NR1H4Q96RI1 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC17.99■□□□□ 0.47
NR1H4Q96RI1 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.99■□□□□ 0.47
NR1H4Q96RI1 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NR1H4Q96RI1 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
NR1H4Q96RI1 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NR1H4Q96RI1 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.99■□□□□ 0.47
NR1H4Q96RI1 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NR1H4Q96RI1 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.99■□□□□ 0.47
NR1H4Q96RI1 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NR1H4Q96RI1 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
NR1H4Q96RI1 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NR1H4Q96RI1 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NR1H4Q96RI1 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
NR1H4Q96RI1 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
NR1H4Q96RI1 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
NR1H4Q96RI1 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NR1H4Q96RI1 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NR1H4Q96RI1 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NR1H4Q96RI1 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NR1H4Q96RI1 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NR1H4Q96RI1 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC17.98■□□□□ 0.47
NR1H4Q96RI1 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
NR1H4Q96RI1 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC17.98■□□□□ 0.47
NR1H4Q96RI1 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
NR1H4Q96RI1 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
NR1H4Q96RI1 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
NR1H4Q96RI1 AC233992.3-201ENST00000607491 485 ntBASIC17.98■□□□□ 0.47
NR1H4Q96RI1 AC008406.3-201ENST00000620001 1374 ntBASIC17.98■□□□□ 0.47
NR1H4Q96RI1 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NR1H4Q96RI1 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
NR1H4Q96RI1 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
NR1H4Q96RI1 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
NR1H4Q96RI1 AL645608.8-201ENST00000606034 2086 ntBASIC17.98■□□□□ 0.47
NR1H4Q96RI1 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NR1H4Q96RI1 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NR1H4Q96RI1 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
NR1H4Q96RI1 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NR1H4Q96RI1 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
NR1H4Q96RI1 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms