Protein–RNA interactions for Protein: Q96PU9

ODF3, Outer dense fiber protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF3Q96PU9 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
ODF3Q96PU9 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ODF3Q96PU9 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ODF3Q96PU9 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
ODF3Q96PU9 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
ODF3Q96PU9 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
ODF3Q96PU9 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
ODF3Q96PU9 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ODF3Q96PU9 AC239809.2-201ENST00000415381 517 ntBASIC14.12□□□□□ -0.15
ODF3Q96PU9 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC14.12□□□□□ -0.15
ODF3Q96PU9 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC14.12□□□□□ -0.15
ODF3Q96PU9 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC14.12□□□□□ -0.15
ODF3Q96PU9 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC14.12□□□□□ -0.15
ODF3Q96PU9 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ODF3Q96PU9 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC14.12□□□□□ -0.15
ODF3Q96PU9 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC14.12□□□□□ -0.15
ODF3Q96PU9 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ODF3Q96PU9 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ODF3Q96PU9 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ODF3Q96PU9 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ODF3Q96PU9 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
ODF3Q96PU9 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
ODF3Q96PU9 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC14.12□□□□□ -0.15
ODF3Q96PU9 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC14.11□□□□□ -0.15
ODF3Q96PU9 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC14.11□□□□□ -0.15
ODF3Q96PU9 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ODF3Q96PU9 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ODF3Q96PU9 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC14.11□□□□□ -0.15
ODF3Q96PU9 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC14.11□□□□□ -0.15
ODF3Q96PU9 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
ODF3Q96PU9 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
ODF3Q96PU9 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ODF3Q96PU9 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ODF3Q96PU9 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ODF3Q96PU9 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.11□□□□□ -0.15
ODF3Q96PU9 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ODF3Q96PU9 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC14.11□□□□□ -0.15
ODF3Q96PU9 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
ODF3Q96PU9 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC14.11□□□□□ -0.15
ODF3Q96PU9 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC14.11□□□□□ -0.15
ODF3Q96PU9 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.11□□□□□ -0.15
ODF3Q96PU9 TSPY23P-201ENST00000440136 739 ntBASIC14.11□□□□□ -0.15
ODF3Q96PU9 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.11□□□□□ -0.15
ODF3Q96PU9 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC14.11□□□□□ -0.15
ODF3Q96PU9 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ODF3Q96PU9 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC14.11□□□□□ -0.15
ODF3Q96PU9 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ODF3Q96PU9 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC14.11□□□□□ -0.15
ODF3Q96PU9 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ODF3Q96PU9 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ODF3Q96PU9 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC14.11□□□□□ -0.15
ODF3Q96PU9 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC14.11□□□□□ -0.15
ODF3Q96PU9 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC14.11□□□□□ -0.15
ODF3Q96PU9 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ODF3Q96PU9 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ODF3Q96PU9 PODN-203ENST00000395871 2744 ntTSL 5 BASIC14.11□□□□□ -0.15
ODF3Q96PU9 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ODF3Q96PU9 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
ODF3Q96PU9 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
ODF3Q96PU9 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ODF3Q96PU9 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
ODF3Q96PU9 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ODF3Q96PU9 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
ODF3Q96PU9 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC14.1□□□□□ -0.15
ODF3Q96PU9 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ODF3Q96PU9 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
ODF3Q96PU9 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ODF3Q96PU9 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
ODF3Q96PU9 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC14.1□□□□□ -0.15
ODF3Q96PU9 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC14.1□□□□□ -0.15
ODF3Q96PU9 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
ODF3Q96PU9 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
ODF3Q96PU9 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC14.1□□□□□ -0.15
ODF3Q96PU9 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC14.1□□□□□ -0.15
ODF3Q96PU9 AC133681.1-201ENST00000465482 601 ntBASIC14.1□□□□□ -0.15
ODF3Q96PU9 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC14.1□□□□□ -0.15
ODF3Q96PU9 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
ODF3Q96PU9 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
ODF3Q96PU9 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
ODF3Q96PU9 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
ODF3Q96PU9 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ODF3Q96PU9 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC14.1□□□□□ -0.15
ODF3Q96PU9 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
ODF3Q96PU9 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ODF3Q96PU9 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ODF3Q96PU9 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ODF3Q96PU9 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ODF3Q96PU9 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC14.09□□□□□ -0.15
ODF3Q96PU9 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
ODF3Q96PU9 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
ODF3Q96PU9 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
ODF3Q96PU9 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC14.09□□□□□ -0.15
ODF3Q96PU9 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ODF3Q96PU9 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC14.09□□□□□ -0.15
ODF3Q96PU9 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ODF3Q96PU9 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC14.09□□□□□ -0.15
ODF3Q96PU9 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ODF3Q96PU9 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ODF3Q96PU9 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ODF3Q96PU9 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms