Protein–RNA interactions for Protein: Q96PB8

LRRC3B, Leucine-rich repeat-containing protein 3B, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3BQ96PB8 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
LRRC3BQ96PB8 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
LRRC3BQ96PB8 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LRRC3BQ96PB8 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
LRRC3BQ96PB8 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
LRRC3BQ96PB8 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
LRRC3BQ96PB8 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
LRRC3BQ96PB8 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.57■□□□□ 0.72
LRRC3BQ96PB8 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LRRC3BQ96PB8 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LRRC3BQ96PB8 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LRRC3BQ96PB8 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.57■□□□□ 0.72
LRRC3BQ96PB8 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LRRC3BQ96PB8 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LRRC3BQ96PB8 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC19.57■□□□□ 0.72
LRRC3BQ96PB8 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.57■□□□□ 0.72
LRRC3BQ96PB8 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC19.57■□□□□ 0.72
LRRC3BQ96PB8 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC19.57■□□□□ 0.72
LRRC3BQ96PB8 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LRRC3BQ96PB8 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LRRC3BQ96PB8 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
LRRC3BQ96PB8 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.57■□□□□ 0.72
LRRC3BQ96PB8 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.57■□□□□ 0.72
LRRC3BQ96PB8 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
LRRC3BQ96PB8 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LRRC3BQ96PB8 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.57■□□□□ 0.72
LRRC3BQ96PB8 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRRC3BQ96PB8 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
LRRC3BQ96PB8 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.56■□□□□ 0.72
LRRC3BQ96PB8 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRRC3BQ96PB8 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.56■□□□□ 0.72
LRRC3BQ96PB8 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LRRC3BQ96PB8 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRRC3BQ96PB8 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRRC3BQ96PB8 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LRRC3BQ96PB8 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC19.56■□□□□ 0.72
LRRC3BQ96PB8 RASA4DP-201ENST00000460726 1199 ntBASIC19.56■□□□□ 0.72
LRRC3BQ96PB8 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC19.56■□□□□ 0.72
LRRC3BQ96PB8 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.56■□□□□ 0.72
LRRC3BQ96PB8 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
LRRC3BQ96PB8 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRRC3BQ96PB8 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRRC3BQ96PB8 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.56■□□□□ 0.72
LRRC3BQ96PB8 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRRC3BQ96PB8 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.56■□□□□ 0.72
LRRC3BQ96PB8 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.56■□□□□ 0.72
LRRC3BQ96PB8 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LRRC3BQ96PB8 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LRRC3BQ96PB8 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LRRC3BQ96PB8 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LRRC3BQ96PB8 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRRC3BQ96PB8 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.55■□□□□ 0.72
LRRC3BQ96PB8 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRRC3BQ96PB8 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.55■□□□□ 0.72
LRRC3BQ96PB8 AC036111.1-201ENST00000533973 1582 ntBASIC19.55■□□□□ 0.72
LRRC3BQ96PB8 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.55■□□□□ 0.72
LRRC3BQ96PB8 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.55■□□□□ 0.72
LRRC3BQ96PB8 AC024243.1-201ENST00000609234 778 ntBASIC19.55■□□□□ 0.72
LRRC3BQ96PB8 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19.55■□□□□ 0.72
LRRC3BQ96PB8 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.55■□□□□ 0.72
LRRC3BQ96PB8 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
LRRC3BQ96PB8 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.55■□□□□ 0.72
LRRC3BQ96PB8 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.55■□□□□ 0.72
LRRC3BQ96PB8 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.55■□□□□ 0.72
LRRC3BQ96PB8 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.55■□□□□ 0.72
LRRC3BQ96PB8 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRRC3BQ96PB8 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRRC3BQ96PB8 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRRC3BQ96PB8 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRRC3BQ96PB8 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRRC3BQ96PB8 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRRC3BQ96PB8 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.54■□□□□ 0.72
LRRC3BQ96PB8 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LRRC3BQ96PB8 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LRRC3BQ96PB8 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRRC3BQ96PB8 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC19.54■□□□□ 0.72
LRRC3BQ96PB8 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LRRC3BQ96PB8 AC012313.10-201ENST00000623509 926 ntBASIC19.54■□□□□ 0.72
LRRC3BQ96PB8 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.54■□□□□ 0.72
LRRC3BQ96PB8 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRRC3BQ96PB8 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.54■□□□□ 0.72
LRRC3BQ96PB8 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.54■□□□□ 0.72
LRRC3BQ96PB8 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRRC3BQ96PB8 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LRRC3BQ96PB8 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.54■□□□□ 0.72
LRRC3BQ96PB8 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
LRRC3BQ96PB8 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LRRC3BQ96PB8 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRRC3BQ96PB8 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRRC3BQ96PB8 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRRC3BQ96PB8 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
LRRC3BQ96PB8 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.53■□□□□ 0.72
LRRC3BQ96PB8 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRRC3BQ96PB8 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRRC3BQ96PB8 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRRC3BQ96PB8 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
LRRC3BQ96PB8 NPAP1P7-201ENST00000613027 823 ntBASIC19.53■□□□□ 0.72
LRRC3BQ96PB8 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.53■□□□□ 0.72
LRRC3BQ96PB8 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRRC3BQ96PB8 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms