Protein–RNA interactions for Protein: Q96KN7

RPGRIP1, X-linked retinitis pigmentosa GTPase regulator-interacting protein 1, humanhuman

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1Q96KN7 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC21.05■□□□□ 0.96
RPGRIP1Q96KN7 AC124283.5-201ENST00000624661 1809 ntBASIC21.05■□□□□ 0.96
RPGRIP1Q96KN7 LINC01465-201ENST00000408887 1940 ntBASIC21.05■□□□□ 0.96
RPGRIP1Q96KN7 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RPGRIP1Q96KN7 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RPGRIP1Q96KN7 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RPGRIP1Q96KN7 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
RPGRIP1Q96KN7 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
RPGRIP1Q96KN7 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC21.05■□□□□ 0.96
RPGRIP1Q96KN7 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RPGRIP1Q96KN7 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RPGRIP1Q96KN7 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
RPGRIP1Q96KN7 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RPGRIP1Q96KN7 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
RPGRIP1Q96KN7 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
RPGRIP1Q96KN7 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
RPGRIP1Q96KN7 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RPGRIP1Q96KN7 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RPGRIP1Q96KN7 GOLGA2P11-201ENST00000562660 1621 ntBASIC21.04■□□□□ 0.96
RPGRIP1Q96KN7 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
RPGRIP1Q96KN7 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC21.04■□□□□ 0.96
RPGRIP1Q96KN7 RBM42-202ENST00000586618 771 ntTSL 3 BASIC21.04■□□□□ 0.96
RPGRIP1Q96KN7 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
RPGRIP1Q96KN7 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RPGRIP1Q96KN7 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
RPGRIP1Q96KN7 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RPGRIP1Q96KN7 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RPGRIP1Q96KN7 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RPGRIP1Q96KN7 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC21.04■□□□□ 0.96
RPGRIP1Q96KN7 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RPGRIP1Q96KN7 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RPGRIP1Q96KN7 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
RPGRIP1Q96KN7 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
RPGRIP1Q96KN7 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RPGRIP1Q96KN7 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RPGRIP1Q96KN7 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RPGRIP1Q96KN7 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RPGRIP1Q96KN7 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
RPGRIP1Q96KN7 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RPGRIP1Q96KN7 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
RPGRIP1Q96KN7 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RPGRIP1Q96KN7 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RPGRIP1Q96KN7 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RPGRIP1Q96KN7 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
RPGRIP1Q96KN7 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC21.03■□□□□ 0.96
RPGRIP1Q96KN7 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC21.03■□□□□ 0.96
RPGRIP1Q96KN7 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC21.03■□□□□ 0.96
RPGRIP1Q96KN7 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RPGRIP1Q96KN7 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC21.03■□□□□ 0.96
RPGRIP1Q96KN7 NEFHP1-201ENST00000412845 2629 ntBASIC21.03■□□□□ 0.96
RPGRIP1Q96KN7 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RPGRIP1Q96KN7 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RPGRIP1Q96KN7 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC21.02■□□□□ 0.96
RPGRIP1Q96KN7 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC21.02■□□□□ 0.96
RPGRIP1Q96KN7 AC009237.14-201ENST00000609975 1594 ntBASIC21.02■□□□□ 0.96
RPGRIP1Q96KN7 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RPGRIP1Q96KN7 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC21.02■□□□□ 0.96
RPGRIP1Q96KN7 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RPGRIP1Q96KN7 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RPGRIP1Q96KN7 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
RPGRIP1Q96KN7 SLC25A3P1-201ENST00000443844 931 ntBASIC21.02■□□□□ 0.96
RPGRIP1Q96KN7 AC104076.2-201ENST00000448912 469 ntBASIC21.02■□□□□ 0.96
RPGRIP1Q96KN7 TMA16-209ENST00000513272 803 ntTSL 2 BASIC21.02■□□□□ 0.96
RPGRIP1Q96KN7 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
RPGRIP1Q96KN7 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC21.02■□□□□ 0.96
RPGRIP1Q96KN7 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
RPGRIP1Q96KN7 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC21.02■□□□□ 0.96
RPGRIP1Q96KN7 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RPGRIP1Q96KN7 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RPGRIP1Q96KN7 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
RPGRIP1Q96KN7 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC21.01■□□□□ 0.95
RPGRIP1Q96KN7 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
RPGRIP1Q96KN7 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
RPGRIP1Q96KN7 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RPGRIP1Q96KN7 MOK-225ENST00000522867 1883 ntTSL 5 BASIC21.01■□□□□ 0.95
RPGRIP1Q96KN7 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RPGRIP1Q96KN7 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
RPGRIP1Q96KN7 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
RPGRIP1Q96KN7 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
RPGRIP1Q96KN7 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
RPGRIP1Q96KN7 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RPGRIP1Q96KN7 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RPGRIP1Q96KN7 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC21.01■□□□□ 0.95
RPGRIP1Q96KN7 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
RPGRIP1Q96KN7 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC21.01■□□□□ 0.95
RPGRIP1Q96KN7 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC21.01■□□□□ 0.95
RPGRIP1Q96KN7 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
RPGRIP1Q96KN7 AC010947.1-201ENST00000623454 693 ntBASIC21.01■□□□□ 0.95
RPGRIP1Q96KN7 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
RPGRIP1Q96KN7 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RPGRIP1Q96KN7 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RPGRIP1Q96KN7 AC073508.3-201ENST00000619697 1419 ntBASIC21.01■□□□□ 0.95
RPGRIP1Q96KN7 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
RPGRIP1Q96KN7 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
RPGRIP1Q96KN7 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RPGRIP1Q96KN7 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RPGRIP1Q96KN7 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RPGRIP1Q96KN7 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RPGRIP1Q96KN7 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC21■□□□□ 0.95
RPGRIP1Q96KN7 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms