Protein–RNA interactions for Protein: Q96KA5

CLPTM1L, Cleft lip and palate transmembrane protein 1-like protein, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1LQ96KA5 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLPTM1LQ96KA5 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLPTM1LQ96KA5 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLPTM1LQ96KA5 AC009053.2-201ENST00000563701 2365 ntBASIC18.35■□□□□ 0.53
CLPTM1LQ96KA5 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CLPTM1LQ96KA5 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.35■□□□□ 0.53
CLPTM1LQ96KA5 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLPTM1LQ96KA5 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CLPTM1LQ96KA5 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLPTM1LQ96KA5 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CLPTM1LQ96KA5 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
CLPTM1LQ96KA5 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.35■□□□□ 0.53
CLPTM1LQ96KA5 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.35■□□□□ 0.53
CLPTM1LQ96KA5 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLPTM1LQ96KA5 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.34■□□□□ 0.53
CLPTM1LQ96KA5 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLPTM1LQ96KA5 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.34■□□□□ 0.53
CLPTM1LQ96KA5 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CLPTM1LQ96KA5 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
CLPTM1LQ96KA5 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
CLPTM1LQ96KA5 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLPTM1LQ96KA5 MKRN4P-201ENST00000444706 1521 ntBASIC18.34■□□□□ 0.53
CLPTM1LQ96KA5 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLPTM1LQ96KA5 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLPTM1LQ96KA5 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.34■□□□□ 0.53
CLPTM1LQ96KA5 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLPTM1LQ96KA5 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLPTM1LQ96KA5 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLPTM1LQ96KA5 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLPTM1LQ96KA5 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLPTM1LQ96KA5 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLPTM1LQ96KA5 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.34■□□□□ 0.53
CLPTM1LQ96KA5 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLPTM1LQ96KA5 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
CLPTM1LQ96KA5 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.34■□□□□ 0.53
CLPTM1LQ96KA5 STOX2-205ENST00000513034 807 ntTSL 3 BASIC18.34■□□□□ 0.53
CLPTM1LQ96KA5 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC18.34■□□□□ 0.53
CLPTM1LQ96KA5 MFSD11-216ENST00000590393 1141 ntBASIC18.34■□□□□ 0.53
CLPTM1LQ96KA5 AC105020.6-201ENST00000621523 1217 ntBASIC18.34■□□□□ 0.53
CLPTM1LQ96KA5 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLPTM1LQ96KA5 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CLPTM1LQ96KA5 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CLPTM1LQ96KA5 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLPTM1LQ96KA5 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.34■□□□□ 0.53
CLPTM1LQ96KA5 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLPTM1LQ96KA5 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLPTM1LQ96KA5 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLPTM1LQ96KA5 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CLPTM1LQ96KA5 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.33■□□□□ 0.53
CLPTM1LQ96KA5 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CLPTM1LQ96KA5 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.53
CLPTM1LQ96KA5 AC104417.2-201ENST00000562989 1793 ntBASIC18.33■□□□□ 0.53
CLPTM1LQ96KA5 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CLPTM1LQ96KA5 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC18.33■□□□□ 0.53
CLPTM1LQ96KA5 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.33■□□□□ 0.53
CLPTM1LQ96KA5 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CLPTM1LQ96KA5 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CLPTM1LQ96KA5 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLPTM1LQ96KA5 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLPTM1LQ96KA5 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CLPTM1LQ96KA5 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CLPTM1LQ96KA5 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CLPTM1LQ96KA5 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CLPTM1LQ96KA5 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLPTM1LQ96KA5 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CLPTM1LQ96KA5 NALT1-201ENST00000429224 738 ntTSL 5 BASIC18.33■□□□□ 0.52
CLPTM1LQ96KA5 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CLPTM1LQ96KA5 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLPTM1LQ96KA5 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLPTM1LQ96KA5 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLPTM1LQ96KA5 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.33■□□□□ 0.52
CLPTM1LQ96KA5 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CLPTM1LQ96KA5 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
CLPTM1LQ96KA5 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLPTM1LQ96KA5 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.33■□□□□ 0.52
CLPTM1LQ96KA5 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CLPTM1LQ96KA5 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLPTM1LQ96KA5 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLPTM1LQ96KA5 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLPTM1LQ96KA5 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CLPTM1LQ96KA5 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLPTM1LQ96KA5 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLPTM1LQ96KA5 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLPTM1LQ96KA5 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLPTM1LQ96KA5 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLPTM1LQ96KA5 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLPTM1LQ96KA5 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLPTM1LQ96KA5 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLPTM1LQ96KA5 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CLPTM1LQ96KA5 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CLPTM1LQ96KA5 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CLPTM1LQ96KA5 AC110285.6-201ENST00000617652 491 ntBASIC18.32■□□□□ 0.52
CLPTM1LQ96KA5 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.32■□□□□ 0.52
CLPTM1LQ96KA5 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CLPTM1LQ96KA5 AC116351.2-201ENST00000606540 1585 ntBASIC18.32■□□□□ 0.52
CLPTM1LQ96KA5 LINC00896-202ENST00000609602 2128 ntBASIC18.32■□□□□ 0.52
CLPTM1LQ96KA5 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLPTM1LQ96KA5 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLPTM1LQ96KA5 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLPTM1LQ96KA5 AC090340.1-201ENST00000620778 4980 ntBASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms