Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC16.94■□□□□ 0.3
APH1AQ96BI3 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
APH1AQ96BI3 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC16.94■□□□□ 0.3
APH1AQ96BI3 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
APH1AQ96BI3 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC16.94■□□□□ 0.3
APH1AQ96BI3 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
APH1AQ96BI3 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC16.94■□□□□ 0.3
APH1AQ96BI3 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
APH1AQ96BI3 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
APH1AQ96BI3 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC16.94■□□□□ 0.3
APH1AQ96BI3 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
APH1AQ96BI3 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
APH1AQ96BI3 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC16.94■□□□□ 0.3
APH1AQ96BI3 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC16.94■□□□□ 0.3
APH1AQ96BI3 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC16.94■□□□□ 0.3
APH1AQ96BI3 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
APH1AQ96BI3 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC16.94■□□□□ 0.3
APH1AQ96BI3 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
APH1AQ96BI3 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
APH1AQ96BI3 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC16.93■□□□□ 0.3
APH1AQ96BI3 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
APH1AQ96BI3 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC16.93■□□□□ 0.3
APH1AQ96BI3 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC16.93■□□□□ 0.3
APH1AQ96BI3 AC096733.2-201ENST00000609937 1394 ntBASIC16.93■□□□□ 0.3
APH1AQ96BI3 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
APH1AQ96BI3 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
APH1AQ96BI3 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC16.93■□□□□ 0.3
APH1AQ96BI3 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
APH1AQ96BI3 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
APH1AQ96BI3 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC16.93■□□□□ 0.3
APH1AQ96BI3 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
APH1AQ96BI3 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC16.93■□□□□ 0.3
APH1AQ96BI3 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC16.93■□□□□ 0.3
APH1AQ96BI3 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
APH1AQ96BI3 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
APH1AQ96BI3 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC16.93■□□□□ 0.3
APH1AQ96BI3 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
APH1AQ96BI3 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
APH1AQ96BI3 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
APH1AQ96BI3 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
APH1AQ96BI3 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
APH1AQ96BI3 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
APH1AQ96BI3 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
APH1AQ96BI3 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
APH1AQ96BI3 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
APH1AQ96BI3 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
APH1AQ96BI3 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC16.93■□□□□ 0.3
APH1AQ96BI3 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
APH1AQ96BI3 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
APH1AQ96BI3 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
APH1AQ96BI3 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
APH1AQ96BI3 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
APH1AQ96BI3 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
APH1AQ96BI3 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC16.92■□□□□ 0.3
APH1AQ96BI3 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
APH1AQ96BI3 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
APH1AQ96BI3 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
APH1AQ96BI3 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
APH1AQ96BI3 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
APH1AQ96BI3 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC16.92■□□□□ 0.3
APH1AQ96BI3 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC16.92■□□□□ 0.3
APH1AQ96BI3 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
APH1AQ96BI3 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC16.92■□□□□ 0.3
APH1AQ96BI3 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC16.92■□□□□ 0.3
APH1AQ96BI3 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
APH1AQ96BI3 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC16.92■□□□□ 0.3
APH1AQ96BI3 KRT8P11-201ENST00000409686 1436 ntBASIC16.92■□□□□ 0.3
APH1AQ96BI3 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC16.92■□□□□ 0.3
APH1AQ96BI3 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC16.92■□□□□ 0.3
APH1AQ96BI3 AC093484.2-201ENST00000580996 2166 ntBASIC16.92■□□□□ 0.3
APH1AQ96BI3 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
APH1AQ96BI3 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC16.92■□□□□ 0.3
APH1AQ96BI3 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
APH1AQ96BI3 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC16.92■□□□□ 0.3
APH1AQ96BI3 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
APH1AQ96BI3 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC16.92■□□□□ 0.3
APH1AQ96BI3 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
APH1AQ96BI3 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
APH1AQ96BI3 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
APH1AQ96BI3 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
APH1AQ96BI3 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
APH1AQ96BI3 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC16.91■□□□□ 0.3
APH1AQ96BI3 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
APH1AQ96BI3 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
APH1AQ96BI3 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
APH1AQ96BI3 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
APH1AQ96BI3 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
APH1AQ96BI3 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
APH1AQ96BI3 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC16.91■□□□□ 0.3
APH1AQ96BI3 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
APH1AQ96BI3 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
APH1AQ96BI3 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC16.91■□□□□ 0.3
APH1AQ96BI3 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC16.91■□□□□ 0.3
APH1AQ96BI3 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC16.91■□□□□ 0.3
APH1AQ96BI3 AC087499.1-201ENST00000418141 1075 ntBASIC16.91■□□□□ 0.3
APH1AQ96BI3 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC16.91■□□□□ 0.3
APH1AQ96BI3 TSPY23P-201ENST00000440136 739 ntBASIC16.91■□□□□ 0.3
APH1AQ96BI3 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC16.91■□□□□ 0.3
APH1AQ96BI3 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
APH1AQ96BI3 FDX2-206ENST00000492239 773 ntTSL 2 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms