Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RFT1Q96AA3 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RFT1Q96AA3 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RFT1Q96AA3 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RFT1Q96AA3 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RFT1Q96AA3 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
RFT1Q96AA3 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RFT1Q96AA3 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RFT1Q96AA3 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
RFT1Q96AA3 AC068880.1-201ENST00000507289 2297 ntBASIC16.91■□□□□ 0.3
RFT1Q96AA3 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.91■□□□□ 0.3
RFT1Q96AA3 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RFT1Q96AA3 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RFT1Q96AA3 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RFT1Q96AA3 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC16.91■□□□□ 0.3
RFT1Q96AA3 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RFT1Q96AA3 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
RFT1Q96AA3 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
RFT1Q96AA3 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC16.91■□□□□ 0.3
RFT1Q96AA3 LSM12P1-201ENST00000411836 588 ntBASIC16.91■□□□□ 0.3
RFT1Q96AA3 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RFT1Q96AA3 HES2-205ENST00000487437 968 ntTSL 3 BASIC16.91■□□□□ 0.3
RFT1Q96AA3 PHB2-213ENST00000546111 858 ntTSL 2 BASIC16.91■□□□□ 0.3
RFT1Q96AA3 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC16.91■□□□□ 0.3
RFT1Q96AA3 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC16.91■□□□□ 0.3
RFT1Q96AA3 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
RFT1Q96AA3 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC16.91■□□□□ 0.3
RFT1Q96AA3 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RFT1Q96AA3 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RFT1Q96AA3 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RFT1Q96AA3 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RFT1Q96AA3 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.91■□□□□ 0.3
RFT1Q96AA3 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC16.91■□□□□ 0.3
RFT1Q96AA3 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC16.91■□□□□ 0.3
RFT1Q96AA3 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
RFT1Q96AA3 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
RFT1Q96AA3 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
RFT1Q96AA3 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.91■□□□□ 0.3
RFT1Q96AA3 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RFT1Q96AA3 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RFT1Q96AA3 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RFT1Q96AA3 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RFT1Q96AA3 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
RFT1Q96AA3 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RFT1Q96AA3 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC16.9■□□□□ 0.3
RFT1Q96AA3 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.9■□□□□ 0.3
RFT1Q96AA3 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RFT1Q96AA3 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RFT1Q96AA3 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RFT1Q96AA3 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RFT1Q96AA3 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RFT1Q96AA3 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC16.9■□□□□ 0.3
RFT1Q96AA3 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC16.9■□□□□ 0.3
RFT1Q96AA3 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
RFT1Q96AA3 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RFT1Q96AA3 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC16.9■□□□□ 0.3
RFT1Q96AA3 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC16.9■□□□□ 0.3
RFT1Q96AA3 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC16.9■□□□□ 0.3
RFT1Q96AA3 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC16.9■□□□□ 0.3
RFT1Q96AA3 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC16.9■□□□□ 0.3
RFT1Q96AA3 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC16.9■□□□□ 0.3
RFT1Q96AA3 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC16.9■□□□□ 0.3
RFT1Q96AA3 IKBKGP1-201ENST00000612193 1073 ntBASIC16.9■□□□□ 0.3
RFT1Q96AA3 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC16.9■□□□□ 0.3
RFT1Q96AA3 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.9■□□□□ 0.3
RFT1Q96AA3 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
RFT1Q96AA3 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC16.9■□□□□ 0.3
RFT1Q96AA3 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC16.9■□□□□ 0.3
RFT1Q96AA3 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.9■□□□□ 0.3
RFT1Q96AA3 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RFT1Q96AA3 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC16.9■□□□□ 0.3
RFT1Q96AA3 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RFT1Q96AA3 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RFT1Q96AA3 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
RFT1Q96AA3 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC16.89■□□□□ 0.3
RFT1Q96AA3 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
RFT1Q96AA3 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
RFT1Q96AA3 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
RFT1Q96AA3 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
RFT1Q96AA3 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RFT1Q96AA3 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RFT1Q96AA3 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RFT1Q96AA3 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
RFT1Q96AA3 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RFT1Q96AA3 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC16.89■□□□□ 0.29
RFT1Q96AA3 METTL26-203ENST00000397664 604 ntTSL 2 BASIC16.89■□□□□ 0.29
RFT1Q96AA3 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC16.89■□□□□ 0.29
RFT1Q96AA3 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC16.89■□□□□ 0.29
RFT1Q96AA3 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC16.89■□□□□ 0.29
RFT1Q96AA3 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
RFT1Q96AA3 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RFT1Q96AA3 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
RFT1Q96AA3 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RFT1Q96AA3 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
RFT1Q96AA3 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
RFT1Q96AA3 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.89■□□□□ 0.29
RFT1Q96AA3 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.89■□□□□ 0.29
RFT1Q96AA3 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RFT1Q96AA3 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RFT1Q96AA3 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms