Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF138Q8WVD3 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF138Q8WVD3 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.3■□□□□ 0.36
RNF138Q8WVD3 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
RNF138Q8WVD3 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.3■□□□□ 0.36
RNF138Q8WVD3 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.3■□□□□ 0.36
RNF138Q8WVD3 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.3■□□□□ 0.36
RNF138Q8WVD3 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.3■□□□□ 0.36
RNF138Q8WVD3 FAM87A-204ENST00000613235 858 ntBASIC17.3■□□□□ 0.36
RNF138Q8WVD3 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
RNF138Q8WVD3 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF138Q8WVD3 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
RNF138Q8WVD3 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RNF138Q8WVD3 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.3■□□□□ 0.36
RNF138Q8WVD3 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.3■□□□□ 0.36
RNF138Q8WVD3 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.3■□□□□ 0.36
RNF138Q8WVD3 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.3■□□□□ 0.36
RNF138Q8WVD3 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF138Q8WVD3 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF138Q8WVD3 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF138Q8WVD3 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RNF138Q8WVD3 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF138Q8WVD3 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
RNF138Q8WVD3 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF138Q8WVD3 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RNF138Q8WVD3 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF138Q8WVD3 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
RNF138Q8WVD3 AC211429.1-201ENST00000415277 523 ntBASIC17.29■□□□□ 0.36
RNF138Q8WVD3 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.29■□□□□ 0.36
RNF138Q8WVD3 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.29■□□□□ 0.36
RNF138Q8WVD3 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.29■□□□□ 0.36
RNF138Q8WVD3 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.29■□□□□ 0.36
RNF138Q8WVD3 MIR4674-201ENST00000582457 87 ntBASIC17.29■□□□□ 0.36
RNF138Q8WVD3 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.29■□□□□ 0.36
RNF138Q8WVD3 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF138Q8WVD3 KRT8P32-201ENST00000512863 1461 ntBASIC17.29■□□□□ 0.36
RNF138Q8WVD3 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF138Q8WVD3 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF138Q8WVD3 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
RNF138Q8WVD3 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RNF138Q8WVD3 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF138Q8WVD3 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF138Q8WVD3 LINC01568-207ENST00000641790 1380 ntBASIC17.28■□□□□ 0.36
RNF138Q8WVD3 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RNF138Q8WVD3 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF138Q8WVD3 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF138Q8WVD3 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF138Q8WVD3 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RNF138Q8WVD3 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF138Q8WVD3 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RNF138Q8WVD3 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RNF138Q8WVD3 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.28■□□□□ 0.36
RNF138Q8WVD3 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.28■□□□□ 0.36
RNF138Q8WVD3 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
RNF138Q8WVD3 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.28■□□□□ 0.36
RNF138Q8WVD3 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
RNF138Q8WVD3 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF138Q8WVD3 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RNF138Q8WVD3 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF138Q8WVD3 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RNF138Q8WVD3 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF138Q8WVD3 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF138Q8WVD3 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF138Q8WVD3 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
RNF138Q8WVD3 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RNF138Q8WVD3 AL512353.2-201ENST00000448759 1962 ntBASIC17.28■□□□□ 0.36
RNF138Q8WVD3 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.27■□□□□ 0.36
RNF138Q8WVD3 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
RNF138Q8WVD3 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
RNF138Q8WVD3 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF138Q8WVD3 AL049812.1-201ENST00000432563 2267 ntBASIC17.27■□□□□ 0.36
RNF138Q8WVD3 KRT18P22-201ENST00000402024 1347 ntBASIC17.27■□□□□ 0.36
RNF138Q8WVD3 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.27■□□□□ 0.36
RNF138Q8WVD3 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF138Q8WVD3 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF138Q8WVD3 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.27■□□□□ 0.36
RNF138Q8WVD3 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.27■□□□□ 0.36
RNF138Q8WVD3 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.27■□□□□ 0.36
RNF138Q8WVD3 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF138Q8WVD3 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF138Q8WVD3 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.27■□□□□ 0.36
RNF138Q8WVD3 AC128688.1-201ENST00000487626 519 ntBASIC17.27■□□□□ 0.36
RNF138Q8WVD3 AP003041.3-201ENST00000527151 707 ntBASIC17.27■□□□□ 0.36
RNF138Q8WVD3 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.27■□□□□ 0.36
RNF138Q8WVD3 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.27■□□□□ 0.36
RNF138Q8WVD3 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.27■□□□□ 0.36
RNF138Q8WVD3 AC133561.5-201ENST00000635547 218 ntBASIC17.27■□□□□ 0.36
RNF138Q8WVD3 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RNF138Q8WVD3 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.27■□□□□ 0.36
RNF138Q8WVD3 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.27■□□□□ 0.35
RNF138Q8WVD3 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC17.27■□□□□ 0.35
RNF138Q8WVD3 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RNF138Q8WVD3 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RNF138Q8WVD3 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.26■□□□□ 0.35
RNF138Q8WVD3 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
RNF138Q8WVD3 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF138Q8WVD3 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.26■□□□□ 0.35
RNF138Q8WVD3 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RNF138Q8WVD3 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.26■□□□□ 0.35
RNF138Q8WVD3 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms