Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
CHD5Q8TDI0 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHD5Q8TDI0 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.34■□□□□ 0.69
CHD5Q8TDI0 AC211429.1-201ENST00000415277 523 ntBASIC19.34■□□□□ 0.69
CHD5Q8TDI0 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC19.34■□□□□ 0.69
CHD5Q8TDI0 NAPSB-206ENST00000562112 1266 ntBASIC19.34■□□□□ 0.69
CHD5Q8TDI0 AL353719.1-201ENST00000566847 864 ntBASIC19.34■□□□□ 0.69
CHD5Q8TDI0 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.34■□□□□ 0.69
CHD5Q8TDI0 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.34■□□□□ 0.69
CHD5Q8TDI0 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CHD5Q8TDI0 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CHD5Q8TDI0 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.34■□□□□ 0.69
CHD5Q8TDI0 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CHD5Q8TDI0 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHD5Q8TDI0 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHD5Q8TDI0 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CHD5Q8TDI0 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.34■□□□□ 0.69
CHD5Q8TDI0 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHD5Q8TDI0 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHD5Q8TDI0 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHD5Q8TDI0 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CHD5Q8TDI0 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC19.33■□□□□ 0.69
CHD5Q8TDI0 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
CHD5Q8TDI0 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.69
CHD5Q8TDI0 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.33■□□□□ 0.69
CHD5Q8TDI0 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
CHD5Q8TDI0 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CHD5Q8TDI0 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
CHD5Q8TDI0 KRT8P3-201ENST00000519669 1449 ntBASIC19.33■□□□□ 0.69
CHD5Q8TDI0 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CHD5Q8TDI0 HEIH-201ENST00000623091 1652 ntBASIC19.33■□□□□ 0.69
CHD5Q8TDI0 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CHD5Q8TDI0 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CHD5Q8TDI0 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.33■□□□□ 0.68
CHD5Q8TDI0 RCN1P1-201ENST00000400413 996 ntBASIC19.33■□□□□ 0.68
CHD5Q8TDI0 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CHD5Q8TDI0 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.33■□□□□ 0.68
CHD5Q8TDI0 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
CHD5Q8TDI0 RBM42-202ENST00000586618 771 ntTSL 3 BASIC19.33■□□□□ 0.68
CHD5Q8TDI0 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.33■□□□□ 0.68
CHD5Q8TDI0 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
CHD5Q8TDI0 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
CHD5Q8TDI0 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CHD5Q8TDI0 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CHD5Q8TDI0 KRT18P22-201ENST00000402024 1347 ntBASIC19.33■□□□□ 0.68
CHD5Q8TDI0 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CHD5Q8TDI0 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
CHD5Q8TDI0 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CHD5Q8TDI0 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CHD5Q8TDI0 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CHD5Q8TDI0 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CHD5Q8TDI0 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHD5Q8TDI0 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CHD5Q8TDI0 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CHD5Q8TDI0 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHD5Q8TDI0 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.32■□□□□ 0.68
CHD5Q8TDI0 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.32■□□□□ 0.68
CHD5Q8TDI0 CCR12P-201ENST00000446203 998 ntBASIC19.32■□□□□ 0.68
CHD5Q8TDI0 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHD5Q8TDI0 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.32■□□□□ 0.68
CHD5Q8TDI0 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC19.32■□□□□ 0.68
CHD5Q8TDI0 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.32■□□□□ 0.68
CHD5Q8TDI0 AC073508.3-201ENST00000619697 1419 ntBASIC19.32■□□□□ 0.68
CHD5Q8TDI0 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.32■□□□□ 0.68
CHD5Q8TDI0 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHD5Q8TDI0 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHD5Q8TDI0 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHD5Q8TDI0 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.32■□□□□ 0.68
CHD5Q8TDI0 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHD5Q8TDI0 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHD5Q8TDI0 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
CHD5Q8TDI0 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHD5Q8TDI0 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CHD5Q8TDI0 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.32■□□□□ 0.68
CHD5Q8TDI0 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHD5Q8TDI0 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CHD5Q8TDI0 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CHD5Q8TDI0 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHD5Q8TDI0 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.31■□□□□ 0.68
CHD5Q8TDI0 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.31■□□□□ 0.68
CHD5Q8TDI0 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.31■□□□□ 0.68
CHD5Q8TDI0 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC19.31■□□□□ 0.68
CHD5Q8TDI0 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.31■□□□□ 0.68
CHD5Q8TDI0 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.31■□□□□ 0.68
CHD5Q8TDI0 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.31■□□□□ 0.68
CHD5Q8TDI0 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
CHD5Q8TDI0 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHD5Q8TDI0 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHD5Q8TDI0 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CHD5Q8TDI0 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.31■□□□□ 0.68
CHD5Q8TDI0 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
CHD5Q8TDI0 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.31■□□□□ 0.68
CHD5Q8TDI0 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CHD5Q8TDI0 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CHD5Q8TDI0 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHD5Q8TDI0 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHD5Q8TDI0 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHD5Q8TDI0 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.31■□□□□ 0.68
CHD5Q8TDI0 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHD5Q8TDI0 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms