Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.51■□□□□ 0.87
LMO3Q8TAP4 AC233702.5-201ENST00000584107 538 ntBASIC20.51■□□□□ 0.87
LMO3Q8TAP4 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20.51■□□□□ 0.87
LMO3Q8TAP4 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC20.51■□□□□ 0.87
LMO3Q8TAP4 CD177P1-201ENST00000606252 935 ntBASIC20.51■□□□□ 0.87
LMO3Q8TAP4 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LMO3Q8TAP4 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LMO3Q8TAP4 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
LMO3Q8TAP4 AL031598.1-201ENST00000561511 1773 ntBASIC20.51■□□□□ 0.87
LMO3Q8TAP4 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
LMO3Q8TAP4 AL135905.2-201ENST00000584934 1404 ntBASIC20.51■□□□□ 0.87
LMO3Q8TAP4 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LMO3Q8TAP4 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
LMO3Q8TAP4 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC20.51■□□□□ 0.87
LMO3Q8TAP4 AL138781.2-201ENST00000617896 1843 ntBASIC20.5■□□□□ 0.87
LMO3Q8TAP4 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
LMO3Q8TAP4 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC20.5■□□□□ 0.87
LMO3Q8TAP4 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LMO3Q8TAP4 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LMO3Q8TAP4 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
LMO3Q8TAP4 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LMO3Q8TAP4 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LMO3Q8TAP4 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LMO3Q8TAP4 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LMO3Q8TAP4 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LMO3Q8TAP4 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC20.5■□□□□ 0.87
LMO3Q8TAP4 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.5■□□□□ 0.87
LMO3Q8TAP4 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.5■□□□□ 0.87
LMO3Q8TAP4 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC20.5■□□□□ 0.87
LMO3Q8TAP4 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
LMO3Q8TAP4 Z99916.2-201ENST00000604037 246 ntBASIC20.5■□□□□ 0.87
LMO3Q8TAP4 MIR6786-201ENST00000616843 113 ntBASIC20.5■□□□□ 0.87
LMO3Q8TAP4 AC113410.3-201ENST00000623366 203 ntBASIC20.5■□□□□ 0.87
LMO3Q8TAP4 TMEM191A-211ENST00000637163 1067 ntBASIC20.5■□□□□ 0.87
LMO3Q8TAP4 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LMO3Q8TAP4 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.5■□□□□ 0.87
LMO3Q8TAP4 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LMO3Q8TAP4 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
LMO3Q8TAP4 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC20.5■□□□□ 0.87
LMO3Q8TAP4 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
LMO3Q8TAP4 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
LMO3Q8TAP4 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LMO3Q8TAP4 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LMO3Q8TAP4 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LMO3Q8TAP4 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC20.49■□□□□ 0.87
LMO3Q8TAP4 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LMO3Q8TAP4 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LMO3Q8TAP4 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LMO3Q8TAP4 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
LMO3Q8TAP4 AC012618.2-201ENST00000428058 849 ntBASIC20.49■□□□□ 0.87
LMO3Q8TAP4 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LMO3Q8TAP4 PRSS44-201ENST00000515154 1146 ntBASIC20.49■□□□□ 0.87
LMO3Q8TAP4 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.49■□□□□ 0.87
LMO3Q8TAP4 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.49■□□□□ 0.87
LMO3Q8TAP4 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.49■□□□□ 0.87
LMO3Q8TAP4 AC011298.2-201ENST00000617989 482 ntBASIC20.49■□□□□ 0.87
LMO3Q8TAP4 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.49■□□□□ 0.87
LMO3Q8TAP4 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.49■□□□□ 0.87
LMO3Q8TAP4 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LMO3Q8TAP4 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LMO3Q8TAP4 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LMO3Q8TAP4 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.49■□□□□ 0.87
LMO3Q8TAP4 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.49■□□□□ 0.87
LMO3Q8TAP4 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC20.48■□□□□ 0.87
LMO3Q8TAP4 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC20.48■□□□□ 0.87
LMO3Q8TAP4 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
LMO3Q8TAP4 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC20.48■□□□□ 0.87
LMO3Q8TAP4 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20.48■□□□□ 0.87
LMO3Q8TAP4 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
LMO3Q8TAP4 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.48■□□□□ 0.87
LMO3Q8TAP4 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.48■□□□□ 0.87
LMO3Q8TAP4 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.48■□□□□ 0.87
LMO3Q8TAP4 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LMO3Q8TAP4 AC116562.2-201ENST00000507042 360 ntBASIC20.48■□□□□ 0.87
LMO3Q8TAP4 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
LMO3Q8TAP4 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
LMO3Q8TAP4 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LMO3Q8TAP4 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LMO3Q8TAP4 AL512353.2-201ENST00000448759 1962 ntBASIC20.48■□□□□ 0.87
LMO3Q8TAP4 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
LMO3Q8TAP4 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
LMO3Q8TAP4 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC20.48■□□□□ 0.87
LMO3Q8TAP4 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC20.47■□□□□ 0.87
LMO3Q8TAP4 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LMO3Q8TAP4 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LMO3Q8TAP4 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LMO3Q8TAP4 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
LMO3Q8TAP4 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LMO3Q8TAP4 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.47■□□□□ 0.87
LMO3Q8TAP4 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.47■□□□□ 0.87
LMO3Q8TAP4 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.47■□□□□ 0.87
LMO3Q8TAP4 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LMO3Q8TAP4 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC20.47■□□□□ 0.87
LMO3Q8TAP4 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LMO3Q8TAP4 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.47■□□□□ 0.87
LMO3Q8TAP4 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
LMO3Q8TAP4 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.47■□□□□ 0.87
LMO3Q8TAP4 AL049637.2-201ENST00000641778 930 ntBASIC20.47■□□□□ 0.87
LMO3Q8TAP4 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LMO3Q8TAP4 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms