Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 RNPS1P1-201ENST00000507437 918 ntBASIC25.57■■□□□ 1.68
COL22A1Q8NFW1 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC25.57■■□□□ 1.68
COL22A1Q8NFW1 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
COL22A1Q8NFW1 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC25.57■■□□□ 1.68
COL22A1Q8NFW1 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
COL22A1Q8NFW1 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC25.57■■□□□ 1.68
COL22A1Q8NFW1 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
COL22A1Q8NFW1 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
COL22A1Q8NFW1 FBXW4P1-201ENST00000426721 2239 ntBASIC25.57■■□□□ 1.68
COL22A1Q8NFW1 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC25.57■■□□□ 1.68
COL22A1Q8NFW1 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC25.57■■□□□ 1.68
COL22A1Q8NFW1 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
COL22A1Q8NFW1 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC25.57■■□□□ 1.68
COL22A1Q8NFW1 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC25.57■■□□□ 1.68
COL22A1Q8NFW1 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
COL22A1Q8NFW1 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
COL22A1Q8NFW1 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC25.56■■□□□ 1.68
COL22A1Q8NFW1 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
COL22A1Q8NFW1 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC25.56■■□□□ 1.68
COL22A1Q8NFW1 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
COL22A1Q8NFW1 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC25.56■■□□□ 1.68
COL22A1Q8NFW1 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC25.56■■□□□ 1.68
COL22A1Q8NFW1 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC25.56■■□□□ 1.68
COL22A1Q8NFW1 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC25.56■■□□□ 1.68
COL22A1Q8NFW1 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC25.56■■□□□ 1.68
COL22A1Q8NFW1 AC064862.7-201ENST00000604520 867 ntBASIC25.56■■□□□ 1.68
COL22A1Q8NFW1 HOTTIP_1.1-201ENST00000620415 57 ntBASIC25.56■■□□□ 1.68
COL22A1Q8NFW1 AC112497.1-201ENST00000624824 639 ntBASIC25.56■■□□□ 1.68
COL22A1Q8NFW1 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
COL22A1Q8NFW1 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
COL22A1Q8NFW1 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC25.56■■□□□ 1.68
COL22A1Q8NFW1 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
COL22A1Q8NFW1 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
COL22A1Q8NFW1 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
COL22A1Q8NFW1 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
COL22A1Q8NFW1 EMD-201ENST00000369835 966 ntTSL 3 BASIC25.55■■□□□ 1.68
COL22A1Q8NFW1 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC25.55■■□□□ 1.68
COL22A1Q8NFW1 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC25.55■■□□□ 1.68
COL22A1Q8NFW1 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC25.55■■□□□ 1.68
COL22A1Q8NFW1 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC25.55■■□□□ 1.68
COL22A1Q8NFW1 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC25.55■■□□□ 1.68
COL22A1Q8NFW1 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC25.55■■□□□ 1.68
COL22A1Q8NFW1 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC25.55■■□□□ 1.68
COL22A1Q8NFW1 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC25.55■■□□□ 1.68
COL22A1Q8NFW1 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
COL22A1Q8NFW1 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC25.55■■□□□ 1.68
COL22A1Q8NFW1 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC25.55■■□□□ 1.68
COL22A1Q8NFW1 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
COL22A1Q8NFW1 AC104417.2-201ENST00000562989 1793 ntBASIC25.55■■□□□ 1.68
COL22A1Q8NFW1 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC25.55■■□□□ 1.68
COL22A1Q8NFW1 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC25.55■■□□□ 1.68
COL22A1Q8NFW1 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
COL22A1Q8NFW1 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
COL22A1Q8NFW1 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC25.55■■□□□ 1.68
COL22A1Q8NFW1 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
COL22A1Q8NFW1 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC25.54■■□□□ 1.68
COL22A1Q8NFW1 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
COL22A1Q8NFW1 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC25.54■■□□□ 1.68
COL22A1Q8NFW1 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
COL22A1Q8NFW1 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
COL22A1Q8NFW1 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC25.54■■□□□ 1.68
COL22A1Q8NFW1 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
COL22A1Q8NFW1 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
COL22A1Q8NFW1 AL031284.1-201ENST00000419297 478 ntBASIC25.54■■□□□ 1.68
COL22A1Q8NFW1 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC25.54■■□□□ 1.68
COL22A1Q8NFW1 KRT18P23-201ENST00000435622 1283 ntBASIC25.54■■□□□ 1.68
COL22A1Q8NFW1 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC25.54■■□□□ 1.68
COL22A1Q8NFW1 AC148477.8-201ENST00000624298 468 ntBASIC25.54■■□□□ 1.68
COL22A1Q8NFW1 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
COL22A1Q8NFW1 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
COL22A1Q8NFW1 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
COL22A1Q8NFW1 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
COL22A1Q8NFW1 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
COL22A1Q8NFW1 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC25.54■■□□□ 1.68
COL22A1Q8NFW1 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
COL22A1Q8NFW1 MED22-202ENST00000371999 987 ntTSL 3 BASIC25.53■■□□□ 1.68
COL22A1Q8NFW1 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC25.53■■□□□ 1.68
COL22A1Q8NFW1 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
COL22A1Q8NFW1 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC25.53■■□□□ 1.68
COL22A1Q8NFW1 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC25.53■■□□□ 1.68
COL22A1Q8NFW1 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
COL22A1Q8NFW1 RPL18-209ENST00000550645 463 ntTSL 5 BASIC25.53■■□□□ 1.68
COL22A1Q8NFW1 RPL18-214ENST00000552588 559 ntTSL 3 BASIC25.53■■□□□ 1.68
COL22A1Q8NFW1 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
COL22A1Q8NFW1 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
COL22A1Q8NFW1 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
COL22A1Q8NFW1 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
COL22A1Q8NFW1 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC25.53■■□□□ 1.68
COL22A1Q8NFW1 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC25.53■■□□□ 1.68
COL22A1Q8NFW1 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
COL22A1Q8NFW1 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC25.53■■□□□ 1.68
COL22A1Q8NFW1 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
COL22A1Q8NFW1 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC25.53■■□□□ 1.68
COL22A1Q8NFW1 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
COL22A1Q8NFW1 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
COL22A1Q8NFW1 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC25.52■■□□□ 1.68
COL22A1Q8NFW1 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC25.52■■□□□ 1.68
COL22A1Q8NFW1 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC25.52■■□□□ 1.68
COL22A1Q8NFW1 CCNC-219ENST00000627680 896 ntTSL 5 BASIC25.52■■□□□ 1.68
COL22A1Q8NFW1 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms