Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
RTL3Q8N8U3 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RTL3Q8N8U3 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RTL3Q8N8U3 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RTL3Q8N8U3 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
RTL3Q8N8U3 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RTL3Q8N8U3 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RTL3Q8N8U3 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
RTL3Q8N8U3 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
RTL3Q8N8U3 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RTL3Q8N8U3 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RTL3Q8N8U3 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RTL3Q8N8U3 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RTL3Q8N8U3 AC079598.2-202ENST00000546624 1451 ntBASIC19.61■□□□□ 0.73
RTL3Q8N8U3 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
RTL3Q8N8U3 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
RTL3Q8N8U3 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RTL3Q8N8U3 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.61■□□□□ 0.73
RTL3Q8N8U3 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RTL3Q8N8U3 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RTL3Q8N8U3 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RTL3Q8N8U3 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.61■□□□□ 0.73
RTL3Q8N8U3 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RTL3Q8N8U3 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RTL3Q8N8U3 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RTL3Q8N8U3 AC097488.1-201ENST00000507834 756 ntBASIC19.61■□□□□ 0.73
RTL3Q8N8U3 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.61■□□□□ 0.73
RTL3Q8N8U3 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RTL3Q8N8U3 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.61■□□□□ 0.73
RTL3Q8N8U3 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RTL3Q8N8U3 FEM1AP3-201ENST00000403722 1741 ntBASIC19.61■□□□□ 0.73
RTL3Q8N8U3 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RTL3Q8N8U3 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
RTL3Q8N8U3 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RTL3Q8N8U3 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RTL3Q8N8U3 FP475955.4-201ENST00000623131 1990 ntBASIC19.61■□□□□ 0.73
RTL3Q8N8U3 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
RTL3Q8N8U3 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RTL3Q8N8U3 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.6■□□□□ 0.73
RTL3Q8N8U3 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.6■□□□□ 0.73
RTL3Q8N8U3 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RTL3Q8N8U3 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RTL3Q8N8U3 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.6■□□□□ 0.73
RTL3Q8N8U3 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RTL3Q8N8U3 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.6■□□□□ 0.73
RTL3Q8N8U3 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.6■□□□□ 0.73
RTL3Q8N8U3 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
RTL3Q8N8U3 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.6■□□□□ 0.73
RTL3Q8N8U3 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.6■□□□□ 0.73
RTL3Q8N8U3 TSPY15P-201ENST00000457163 923 ntBASIC19.6■□□□□ 0.73
RTL3Q8N8U3 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RTL3Q8N8U3 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RTL3Q8N8U3 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RTL3Q8N8U3 SLC25A1P4-201ENST00000567977 778 ntBASIC19.6■□□□□ 0.73
RTL3Q8N8U3 AP005242.2-201ENST00000580065 1175 ntBASIC19.6■□□□□ 0.73
RTL3Q8N8U3 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RTL3Q8N8U3 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.6■□□□□ 0.73
RTL3Q8N8U3 AP000525.1-201ENST00000608286 694 ntBASIC19.6■□□□□ 0.73
RTL3Q8N8U3 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RTL3Q8N8U3 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RTL3Q8N8U3 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
RTL3Q8N8U3 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RTL3Q8N8U3 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.6■□□□□ 0.73
RTL3Q8N8U3 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RTL3Q8N8U3 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
RTL3Q8N8U3 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
RTL3Q8N8U3 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.6■□□□□ 0.73
RTL3Q8N8U3 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
RTL3Q8N8U3 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
RTL3Q8N8U3 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
RTL3Q8N8U3 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.59■□□□□ 0.73
RTL3Q8N8U3 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RTL3Q8N8U3 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
RTL3Q8N8U3 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RTL3Q8N8U3 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RTL3Q8N8U3 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.59■□□□□ 0.73
RTL3Q8N8U3 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RTL3Q8N8U3 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RTL3Q8N8U3 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
RTL3Q8N8U3 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
RTL3Q8N8U3 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RTL3Q8N8U3 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RTL3Q8N8U3 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RTL3Q8N8U3 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RTL3Q8N8U3 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
RTL3Q8N8U3 MFAP1P1-201ENST00000442257 1255 ntBASIC19.59■□□□□ 0.73
RTL3Q8N8U3 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.59■□□□□ 0.73
RTL3Q8N8U3 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.59■□□□□ 0.73
RTL3Q8N8U3 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
RTL3Q8N8U3 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RTL3Q8N8U3 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RTL3Q8N8U3 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RTL3Q8N8U3 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
RTL3Q8N8U3 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RTL3Q8N8U3 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.59■□□□□ 0.73
RTL3Q8N8U3 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RTL3Q8N8U3 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RTL3Q8N8U3 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RTL3Q8N8U3 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RTL3Q8N8U3 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.58■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms