Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RAB42Q8N4Z0 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB42Q8N4Z0 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB42Q8N4Z0 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.63■□□□□ 0.57
RAB42Q8N4Z0 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.63■□□□□ 0.57
RAB42Q8N4Z0 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB42Q8N4Z0 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.63■□□□□ 0.57
RAB42Q8N4Z0 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.63■□□□□ 0.57
RAB42Q8N4Z0 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.62■□□□□ 0.57
RAB42Q8N4Z0 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAB42Q8N4Z0 SDHAP1-207ENST00000440850 2000 ntBASIC18.62■□□□□ 0.57
RAB42Q8N4Z0 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
RAB42Q8N4Z0 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAB42Q8N4Z0 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAB42Q8N4Z0 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
RAB42Q8N4Z0 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAB42Q8N4Z0 B3GAT3P1-201ENST00000471720 806 ntBASIC18.62■□□□□ 0.57
RAB42Q8N4Z0 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RAB42Q8N4Z0 AC116562.2-201ENST00000507042 360 ntBASIC18.62■□□□□ 0.57
RAB42Q8N4Z0 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.62■□□□□ 0.57
RAB42Q8N4Z0 AP003071.4-201ENST00000562276 1284 ntBASIC18.62■□□□□ 0.57
RAB42Q8N4Z0 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RAB42Q8N4Z0 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
RAB42Q8N4Z0 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAB42Q8N4Z0 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.62■□□□□ 0.57
RAB42Q8N4Z0 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.62■□□□□ 0.57
RAB42Q8N4Z0 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.62■□□□□ 0.57
RAB42Q8N4Z0 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
RAB42Q8N4Z0 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAB42Q8N4Z0 AC093484.2-201ENST00000580996 2166 ntBASIC18.62■□□□□ 0.57
RAB42Q8N4Z0 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.62■□□□□ 0.57
RAB42Q8N4Z0 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
RAB42Q8N4Z0 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAB42Q8N4Z0 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAB42Q8N4Z0 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
RAB42Q8N4Z0 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB42Q8N4Z0 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB42Q8N4Z0 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
RAB42Q8N4Z0 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RAB42Q8N4Z0 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB42Q8N4Z0 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.61■□□□□ 0.57
RAB42Q8N4Z0 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.61■□□□□ 0.57
RAB42Q8N4Z0 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB42Q8N4Z0 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB42Q8N4Z0 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB42Q8N4Z0 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
RAB42Q8N4Z0 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.61■□□□□ 0.57
RAB42Q8N4Z0 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.61■□□□□ 0.57
RAB42Q8N4Z0 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
RAB42Q8N4Z0 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.61■□□□□ 0.57
RAB42Q8N4Z0 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.61■□□□□ 0.57
RAB42Q8N4Z0 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.61■□□□□ 0.57
RAB42Q8N4Z0 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.61■□□□□ 0.57
RAB42Q8N4Z0 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RAB42Q8N4Z0 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB42Q8N4Z0 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.61■□□□□ 0.57
RAB42Q8N4Z0 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RAB42Q8N4Z0 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RAB42Q8N4Z0 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB42Q8N4Z0 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
RAB42Q8N4Z0 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB42Q8N4Z0 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.61■□□□□ 0.57
RAB42Q8N4Z0 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.61■□□□□ 0.57
RAB42Q8N4Z0 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.61■□□□□ 0.57
RAB42Q8N4Z0 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB42Q8N4Z0 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB42Q8N4Z0 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
RAB42Q8N4Z0 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB42Q8N4Z0 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.6■□□□□ 0.57
RAB42Q8N4Z0 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAB42Q8N4Z0 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.6■□□□□ 0.57
RAB42Q8N4Z0 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
RAB42Q8N4Z0 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.6■□□□□ 0.57
RAB42Q8N4Z0 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RAB42Q8N4Z0 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.6■□□□□ 0.57
RAB42Q8N4Z0 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAB42Q8N4Z0 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
RAB42Q8N4Z0 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
RAB42Q8N4Z0 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RAB42Q8N4Z0 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAB42Q8N4Z0 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAB42Q8N4Z0 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RAB42Q8N4Z0 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAB42Q8N4Z0 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.6■□□□□ 0.57
RAB42Q8N4Z0 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
RAB42Q8N4Z0 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
RAB42Q8N4Z0 UNC93B2-201ENST00000285383 730 ntBASIC18.6■□□□□ 0.57
RAB42Q8N4Z0 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAB42Q8N4Z0 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RAB42Q8N4Z0 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.6■□□□□ 0.57
RAB42Q8N4Z0 PRSS44-201ENST00000515154 1146 ntBASIC18.6■□□□□ 0.57
RAB42Q8N4Z0 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.6■□□□□ 0.57
RAB42Q8N4Z0 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.6■□□□□ 0.57
RAB42Q8N4Z0 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAB42Q8N4Z0 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAB42Q8N4Z0 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.6■□□□□ 0.57
RAB42Q8N4Z0 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.6■□□□□ 0.57
RAB42Q8N4Z0 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAB42Q8N4Z0 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.59■□□□□ 0.57
RAB42Q8N4Z0 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms