Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC20.68■□□□□ 0.9
HERC6Q8IVU3 AC011498.5-201ENST00000592027 486 ntBASIC20.68■□□□□ 0.9
HERC6Q8IVU3 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
HERC6Q8IVU3 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HERC6Q8IVU3 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HERC6Q8IVU3 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
HERC6Q8IVU3 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
HERC6Q8IVU3 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.68■□□□□ 0.9
HERC6Q8IVU3 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
HERC6Q8IVU3 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
HERC6Q8IVU3 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HERC6Q8IVU3 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
HERC6Q8IVU3 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.67■□□□□ 0.9
HERC6Q8IVU3 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HERC6Q8IVU3 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.67■□□□□ 0.9
HERC6Q8IVU3 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
HERC6Q8IVU3 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.67■□□□□ 0.9
HERC6Q8IVU3 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
HERC6Q8IVU3 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HERC6Q8IVU3 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC20.67■□□□□ 0.9
HERC6Q8IVU3 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
HERC6Q8IVU3 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC20.67■□□□□ 0.9
HERC6Q8IVU3 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC20.67■□□□□ 0.9
HERC6Q8IVU3 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HERC6Q8IVU3 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC20.67■□□□□ 0.9
HERC6Q8IVU3 MIR3180-1-201ENST00000580374 94 ntBASIC20.67■□□□□ 0.9
HERC6Q8IVU3 MIR3180-3-201ENST00000584616 94 ntBASIC20.67■□□□□ 0.9
HERC6Q8IVU3 AL121672.3-201ENST00000608644 468 ntBASIC20.67■□□□□ 0.9
HERC6Q8IVU3 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC20.67■□□□□ 0.9
HERC6Q8IVU3 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HERC6Q8IVU3 AC016734.2-201ENST00000624325 1377 ntBASIC20.67■□□□□ 0.9
HERC6Q8IVU3 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
HERC6Q8IVU3 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HERC6Q8IVU3 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC20.67■□□□□ 0.9
HERC6Q8IVU3 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HERC6Q8IVU3 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
HERC6Q8IVU3 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HERC6Q8IVU3 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.67■□□□□ 0.9
HERC6Q8IVU3 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC20.67■□□□□ 0.9
HERC6Q8IVU3 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HERC6Q8IVU3 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HERC6Q8IVU3 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.67■□□□□ 0.9
HERC6Q8IVU3 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HERC6Q8IVU3 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
HERC6Q8IVU3 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HERC6Q8IVU3 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HERC6Q8IVU3 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HERC6Q8IVU3 ILF2-202ENST00000368681 726 ntTSL 2 BASIC20.66■□□□□ 0.9
HERC6Q8IVU3 PPIH-202ENST00000372549 327 ntTSL 3 BASIC20.66■□□□□ 0.9
HERC6Q8IVU3 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HERC6Q8IVU3 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC20.66■□□□□ 0.9
HERC6Q8IVU3 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC20.66■□□□□ 0.9
HERC6Q8IVU3 BX276092.5-203ENST00000456199 560 ntBASIC20.66■□□□□ 0.9
HERC6Q8IVU3 AC034232.1-201ENST00000506026 1064 ntBASIC20.66■□□□□ 0.9
HERC6Q8IVU3 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
HERC6Q8IVU3 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC20.66■□□□□ 0.9
HERC6Q8IVU3 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC20.66■□□□□ 0.9
HERC6Q8IVU3 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC20.66■□□□□ 0.9
HERC6Q8IVU3 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HERC6Q8IVU3 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.66■□□□□ 0.9
HERC6Q8IVU3 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
HERC6Q8IVU3 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HERC6Q8IVU3 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HERC6Q8IVU3 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HERC6Q8IVU3 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
HERC6Q8IVU3 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
HERC6Q8IVU3 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HERC6Q8IVU3 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HERC6Q8IVU3 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
HERC6Q8IVU3 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.66■□□□□ 0.9
HERC6Q8IVU3 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.65■□□□□ 0.9
HERC6Q8IVU3 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HERC6Q8IVU3 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
HERC6Q8IVU3 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HERC6Q8IVU3 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HERC6Q8IVU3 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC20.65■□□□□ 0.9
HERC6Q8IVU3 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HERC6Q8IVU3 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC20.65■□□□□ 0.9
HERC6Q8IVU3 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC20.65■□□□□ 0.9
HERC6Q8IVU3 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
HERC6Q8IVU3 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HERC6Q8IVU3 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HERC6Q8IVU3 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HERC6Q8IVU3 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.64■□□□□ 0.9
HERC6Q8IVU3 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC20.64■□□□□ 0.9
HERC6Q8IVU3 TBC1D3P2-202ENST00000577902 1649 ntBASIC20.64■□□□□ 0.9
HERC6Q8IVU3 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
HERC6Q8IVU3 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
HERC6Q8IVU3 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.64■□□□□ 0.89
HERC6Q8IVU3 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HERC6Q8IVU3 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HERC6Q8IVU3 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC20.64■□□□□ 0.89
HERC6Q8IVU3 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC20.64■□□□□ 0.89
HERC6Q8IVU3 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HERC6Q8IVU3 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HERC6Q8IVU3 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
HERC6Q8IVU3 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC20.64■□□□□ 0.89
HERC6Q8IVU3 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HERC6Q8IVU3 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
HERC6Q8IVU3 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms