Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
COL23A1Q86Y22 SLC25A1P1-201ENST00000528351 927 ntBASIC24.02■■□□□ 1.44
COL23A1Q86Y22 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC24.02■■□□□ 1.44
COL23A1Q86Y22 TK1-205ENST00000590862 642 ntTSL 3 BASIC24.02■■□□□ 1.44
COL23A1Q86Y22 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC24.02■■□□□ 1.44
COL23A1Q86Y22 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC24.02■■□□□ 1.44
COL23A1Q86Y22 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
COL23A1Q86Y22 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
COL23A1Q86Y22 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC24.02■■□□□ 1.44
COL23A1Q86Y22 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC24.02■■□□□ 1.44
COL23A1Q86Y22 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
COL23A1Q86Y22 IL9RP2-201ENST00000423948 1312 ntBASIC24.02■■□□□ 1.44
COL23A1Q86Y22 UBC-206ENST00000538617 1303 ntTSL 5 BASIC24.02■■□□□ 1.44
COL23A1Q86Y22 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC24.02■■□□□ 1.44
COL23A1Q86Y22 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
COL23A1Q86Y22 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
COL23A1Q86Y22 Z83836.1-201ENST00000624605 1642 ntBASIC24.02■■□□□ 1.44
COL23A1Q86Y22 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
COL23A1Q86Y22 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
COL23A1Q86Y22 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC24.01■■□□□ 1.43
COL23A1Q86Y22 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
COL23A1Q86Y22 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
COL23A1Q86Y22 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC24.01■■□□□ 1.43
COL23A1Q86Y22 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
COL23A1Q86Y22 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC24.01■■□□□ 1.43
COL23A1Q86Y22 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC24.01■■□□□ 1.43
COL23A1Q86Y22 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
COL23A1Q86Y22 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC24.01■■□□□ 1.43
COL23A1Q86Y22 AC092183.1-201ENST00000469884 875 ntBASIC24.01■■□□□ 1.43
COL23A1Q86Y22 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
COL23A1Q86Y22 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC24.01■■□□□ 1.43
COL23A1Q86Y22 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
COL23A1Q86Y22 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC24.01■■□□□ 1.43
COL23A1Q86Y22 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC24.01■■□□□ 1.43
COL23A1Q86Y22 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
COL23A1Q86Y22 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC24■■□□□ 1.43
COL23A1Q86Y22 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1.43
COL23A1Q86Y22 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1.43
COL23A1Q86Y22 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC24■■□□□ 1.43
COL23A1Q86Y22 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC24■■□□□ 1.43
COL23A1Q86Y22 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
COL23A1Q86Y22 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
COL23A1Q86Y22 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC24■■□□□ 1.43
COL23A1Q86Y22 PPIE-208ENST00000470213 927 ntTSL 3 BASIC24■■□□□ 1.43
COL23A1Q86Y22 AC099336.1-202ENST00000602961 463 ntBASIC24■■□□□ 1.43
COL23A1Q86Y22 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
COL23A1Q86Y22 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
COL23A1Q86Y22 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC24■■□□□ 1.43
COL23A1Q86Y22 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
COL23A1Q86Y22 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC24■■□□□ 1.43
COL23A1Q86Y22 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC24■■□□□ 1.43
COL23A1Q86Y22 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
COL23A1Q86Y22 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
COL23A1Q86Y22 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
COL23A1Q86Y22 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
COL23A1Q86Y22 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
COL23A1Q86Y22 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC23.99■■□□□ 1.43
COL23A1Q86Y22 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC23.99■■□□□ 1.43
COL23A1Q86Y22 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC23.99■■□□□ 1.43
COL23A1Q86Y22 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC23.99■■□□□ 1.43
COL23A1Q86Y22 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC23.99■■□□□ 1.43
COL23A1Q86Y22 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
COL23A1Q86Y22 MIR3180-5-201ENST00000583743 153 ntBASIC23.99■■□□□ 1.43
COL23A1Q86Y22 AC233702.3-201ENST00000578656 1387 ntBASIC23.99■■□□□ 1.43
COL23A1Q86Y22 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
COL23A1Q86Y22 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
COL23A1Q86Y22 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC23.99■■□□□ 1.43
COL23A1Q86Y22 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
COL23A1Q86Y22 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
COL23A1Q86Y22 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
COL23A1Q86Y22 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
COL23A1Q86Y22 AF238378.1-201ENST00000526806 358 ntBASIC23.98■■□□□ 1.43
COL23A1Q86Y22 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC23.98■■□□□ 1.43
COL23A1Q86Y22 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
COL23A1Q86Y22 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
COL23A1Q86Y22 LITAF-220ENST00000620789 692 ntTSL 5 BASIC23.98■■□□□ 1.43
COL23A1Q86Y22 TP73-AS1-207ENST00000624167 988 ntBASIC23.98■■□□□ 1.43
COL23A1Q86Y22 AC112497.1-201ENST00000624824 639 ntBASIC23.98■■□□□ 1.43
COL23A1Q86Y22 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
COL23A1Q86Y22 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
COL23A1Q86Y22 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
COL23A1Q86Y22 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
COL23A1Q86Y22 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC23.98■■□□□ 1.43
COL23A1Q86Y22 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC23.98■■□□□ 1.43
COL23A1Q86Y22 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC23.98■■□□□ 1.43
COL23A1Q86Y22 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
COL23A1Q86Y22 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
COL23A1Q86Y22 BAALC-202ENST00000306391 243 ntTSL 5 BASIC23.97■■□□□ 1.43
COL23A1Q86Y22 BAALC-204ENST00000330955 222 ntTSL 5 BASIC23.97■■□□□ 1.43
COL23A1Q86Y22 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
COL23A1Q86Y22 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
COL23A1Q86Y22 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC23.97■■□□□ 1.43
COL23A1Q86Y22 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
COL23A1Q86Y22 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
COL23A1Q86Y22 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
COL23A1Q86Y22 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC23.97■■□□□ 1.43
COL23A1Q86Y22 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
COL23A1Q86Y22 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
COL23A1Q86Y22 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC23.97■■□□□ 1.43
COL23A1Q86Y22 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC23.97■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms