Protein–RNA interactions for Protein: Q6YHK3

CD109, CD109 antigen, humanhuman

Predictions only

Length 1,445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD109Q6YHK3 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC29.11■■■□□ 2.25
CD109Q6YHK3 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC29.1■■■□□ 2.25
CD109Q6YHK3 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC29.1■■■□□ 2.25
CD109Q6YHK3 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
CD109Q6YHK3 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC29.1■■■□□ 2.25
CD109Q6YHK3 COX10-202ENST00000429152 875 ntTSL 2 BASIC29.1■■■□□ 2.25
CD109Q6YHK3 MCCD1P1-208ENST00000445732 328 ntBASIC29.1■■■□□ 2.25
CD109Q6YHK3 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC29.1■■■□□ 2.25
CD109Q6YHK3 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC29.1■■■□□ 2.25
CD109Q6YHK3 AC005332.3-201ENST00000589904 676 ntBASIC29.1■■■□□ 2.25
CD109Q6YHK3 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
CD109Q6YHK3 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
CD109Q6YHK3 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
CD109Q6YHK3 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
CD109Q6YHK3 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC29.09■■■□□ 2.25
CD109Q6YHK3 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
CD109Q6YHK3 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC29.09■■■□□ 2.25
CD109Q6YHK3 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
CD109Q6YHK3 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
CD109Q6YHK3 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC29.09■■■□□ 2.25
CD109Q6YHK3 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
CD109Q6YHK3 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
CD109Q6YHK3 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
CD109Q6YHK3 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
CD109Q6YHK3 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC29.09■■■□□ 2.25
CD109Q6YHK3 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC29.09■■■□□ 2.25
CD109Q6YHK3 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC29.09■■■□□ 2.25
CD109Q6YHK3 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC29.09■■■□□ 2.25
CD109Q6YHK3 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
CD109Q6YHK3 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC29.09■■■□□ 2.25
CD109Q6YHK3 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC29.09■■■□□ 2.25
CD109Q6YHK3 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC29.09■■■□□ 2.25
CD109Q6YHK3 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC29.09■■■□□ 2.25
CD109Q6YHK3 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
CD109Q6YHK3 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
CD109Q6YHK3 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC29.09■■■□□ 2.25
CD109Q6YHK3 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
CD109Q6YHK3 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC29.08■■■□□ 2.25
CD109Q6YHK3 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC29.08■■■□□ 2.25
CD109Q6YHK3 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC29.08■■■□□ 2.25
CD109Q6YHK3 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC29.08■■■□□ 2.25
CD109Q6YHK3 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC29.08■■■□□ 2.25
CD109Q6YHK3 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC29.08■■■□□ 2.25
CD109Q6YHK3 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC29.08■■■□□ 2.25
CD109Q6YHK3 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC29.08■■■□□ 2.25
CD109Q6YHK3 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC29.08■■■□□ 2.25
CD109Q6YHK3 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC29.08■■■□□ 2.25
CD109Q6YHK3 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC29.08■■■□□ 2.25
CD109Q6YHK3 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC29.08■■■□□ 2.25
CD109Q6YHK3 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
CD109Q6YHK3 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC29.08■■■□□ 2.25
CD109Q6YHK3 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
CD109Q6YHK3 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC29.08■■■□□ 2.25
CD109Q6YHK3 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC29.07■■■□□ 2.24
CD109Q6YHK3 AC243591.1-201ENST00000452967 1364 ntBASIC29.07■■■□□ 2.24
CD109Q6YHK3 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC29.07■■■□□ 2.24
CD109Q6YHK3 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC29.07■■■□□ 2.24
CD109Q6YHK3 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
CD109Q6YHK3 AL031284.1-201ENST00000419297 478 ntBASIC29.07■■■□□ 2.24
CD109Q6YHK3 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC29.07■■■□□ 2.24
CD109Q6YHK3 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC29.07■■■□□ 2.24
CD109Q6YHK3 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC29.07■■■□□ 2.24
CD109Q6YHK3 RNPS1P1-201ENST00000507437 918 ntBASIC29.07■■■□□ 2.24
CD109Q6YHK3 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC29.07■■■□□ 2.24
CD109Q6YHK3 CCNC-219ENST00000627680 896 ntTSL 5 BASIC29.07■■■□□ 2.24
CD109Q6YHK3 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
CD109Q6YHK3 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
CD109Q6YHK3 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
CD109Q6YHK3 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
CD109Q6YHK3 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC29.06■■■□□ 2.24
CD109Q6YHK3 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC29.06■■■□□ 2.24
CD109Q6YHK3 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC29.06■■■□□ 2.24
CD109Q6YHK3 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
CD109Q6YHK3 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
CD109Q6YHK3 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC29.06■■■□□ 2.24
CD109Q6YHK3 KRT18P67-201ENST00000432816 1264 ntBASIC29.06■■■□□ 2.24
CD109Q6YHK3 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC29.06■■■□□ 2.24
CD109Q6YHK3 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC29.06■■■□□ 2.24
CD109Q6YHK3 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC29.06■■■□□ 2.24
CD109Q6YHK3 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC29.06■■■□□ 2.24
CD109Q6YHK3 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC29.06■■■□□ 2.24
CD109Q6YHK3 WWC2-AS2-201ENST00000578387 2183 ntBASIC29.06■■■□□ 2.24
CD109Q6YHK3 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC29.06■■■□□ 2.24
CD109Q6YHK3 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
CD109Q6YHK3 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC29.05■■■□□ 2.24
CD109Q6YHK3 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC29.05■■■□□ 2.24
CD109Q6YHK3 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC29.05■■■□□ 2.24
CD109Q6YHK3 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC29.05■■■□□ 2.24
CD109Q6YHK3 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
CD109Q6YHK3 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC29.05■■■□□ 2.24
CD109Q6YHK3 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC29.05■■■□□ 2.24
CD109Q6YHK3 IGHV3-41-201ENST00000613121 348 ntBASIC29.05■■■□□ 2.24
CD109Q6YHK3 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC29.05■■■□□ 2.24
CD109Q6YHK3 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC29.05■■■□□ 2.24
CD109Q6YHK3 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
CD109Q6YHK3 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
CD109Q6YHK3 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC29.05■■■□□ 2.24
CD109Q6YHK3 NSUN5P1-202ENST00000421140 1535 ntBASIC29.05■■■□□ 2.24
CD109Q6YHK3 NSUN5P2-203ENST00000457352 1529 ntBASIC29.05■■■□□ 2.24
CD109Q6YHK3 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC29.04■■■□□ 2.24
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms