Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CASC4Q6P4E1 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.5■□□□□ 0.71
CASC4Q6P4E1 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
CASC4Q6P4E1 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CASC4Q6P4E1 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CASC4Q6P4E1 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CASC4Q6P4E1 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.49■□□□□ 0.71
CASC4Q6P4E1 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CASC4Q6P4E1 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CASC4Q6P4E1 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CASC4Q6P4E1 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC19.49■□□□□ 0.71
CASC4Q6P4E1 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CASC4Q6P4E1 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CASC4Q6P4E1 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CASC4Q6P4E1 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
CASC4Q6P4E1 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.49■□□□□ 0.71
CASC4Q6P4E1 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.49■□□□□ 0.71
CASC4Q6P4E1 UNC93B4-201ENST00000505679 747 ntBASIC19.49■□□□□ 0.71
CASC4Q6P4E1 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.49■□□□□ 0.71
CASC4Q6P4E1 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.49■□□□□ 0.71
CASC4Q6P4E1 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CASC4Q6P4E1 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.49■□□□□ 0.71
CASC4Q6P4E1 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CASC4Q6P4E1 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CASC4Q6P4E1 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.49■□□□□ 0.71
CASC4Q6P4E1 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.49■□□□□ 0.71
CASC4Q6P4E1 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.49■□□□□ 0.71
CASC4Q6P4E1 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CASC4Q6P4E1 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CASC4Q6P4E1 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CASC4Q6P4E1 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CASC4Q6P4E1 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CASC4Q6P4E1 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CASC4Q6P4E1 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CASC4Q6P4E1 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.48■□□□□ 0.71
CASC4Q6P4E1 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.48■□□□□ 0.71
CASC4Q6P4E1 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.48■□□□□ 0.71
CASC4Q6P4E1 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.48■□□□□ 0.71
CASC4Q6P4E1 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CASC4Q6P4E1 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CASC4Q6P4E1 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.48■□□□□ 0.71
CASC4Q6P4E1 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
CASC4Q6P4E1 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.48■□□□□ 0.71
CASC4Q6P4E1 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.48■□□□□ 0.71
CASC4Q6P4E1 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CASC4Q6P4E1 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CASC4Q6P4E1 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.48■□□□□ 0.71
CASC4Q6P4E1 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CASC4Q6P4E1 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CASC4Q6P4E1 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CASC4Q6P4E1 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CASC4Q6P4E1 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CASC4Q6P4E1 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CASC4Q6P4E1 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CASC4Q6P4E1 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
CASC4Q6P4E1 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CASC4Q6P4E1 AC006333.2-201ENST00000607957 2099 ntBASIC19.47■□□□□ 0.71
CASC4Q6P4E1 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
CASC4Q6P4E1 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CASC4Q6P4E1 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CASC4Q6P4E1 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CASC4Q6P4E1 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CASC4Q6P4E1 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.47■□□□□ 0.71
CASC4Q6P4E1 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.47■□□□□ 0.71
CASC4Q6P4E1 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
CASC4Q6P4E1 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.47■□□□□ 0.71
CASC4Q6P4E1 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.47■□□□□ 0.71
CASC4Q6P4E1 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CASC4Q6P4E1 PRKY-204ENST00000533551 1019 ntBASIC19.47■□□□□ 0.71
CASC4Q6P4E1 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
CASC4Q6P4E1 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CASC4Q6P4E1 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CASC4Q6P4E1 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CASC4Q6P4E1 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CASC4Q6P4E1 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC19.47■□□□□ 0.71
CASC4Q6P4E1 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
CASC4Q6P4E1 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
CASC4Q6P4E1 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.47■□□□□ 0.71
CASC4Q6P4E1 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CASC4Q6P4E1 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.46■□□□□ 0.71
CASC4Q6P4E1 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.46■□□□□ 0.71
CASC4Q6P4E1 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CASC4Q6P4E1 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CASC4Q6P4E1 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CASC4Q6P4E1 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CASC4Q6P4E1 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.46■□□□□ 0.71
CASC4Q6P4E1 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
CASC4Q6P4E1 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CASC4Q6P4E1 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
CASC4Q6P4E1 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CASC4Q6P4E1 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CASC4Q6P4E1 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CASC4Q6P4E1 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CASC4Q6P4E1 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CASC4Q6P4E1 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
CASC4Q6P4E1 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.46■□□□□ 0.71
CASC4Q6P4E1 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CASC4Q6P4E1 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
CASC4Q6P4E1 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CASC4Q6P4E1 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms