Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
RIF1Q5UIP0 MED15P5-201ENST00000423150 992 ntBASIC18.57■□□□□ 0.56
RIF1Q5UIP0 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.57■□□□□ 0.56
RIF1Q5UIP0 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
RIF1Q5UIP0 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
RIF1Q5UIP0 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RIF1Q5UIP0 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RIF1Q5UIP0 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.57■□□□□ 0.56
RIF1Q5UIP0 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.57■□□□□ 0.56
RIF1Q5UIP0 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
RIF1Q5UIP0 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RIF1Q5UIP0 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RIF1Q5UIP0 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
RIF1Q5UIP0 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
RIF1Q5UIP0 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC18.57■□□□□ 0.56
RIF1Q5UIP0 AL591424.1-201ENST00000442569 1213 ntBASIC18.57■□□□□ 0.56
RIF1Q5UIP0 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.57■□□□□ 0.56
RIF1Q5UIP0 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
RIF1Q5UIP0 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC18.57■□□□□ 0.56
RIF1Q5UIP0 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RIF1Q5UIP0 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.57■□□□□ 0.56
RIF1Q5UIP0 SART3-203ENST00000546611 1184 ntBASIC18.57■□□□□ 0.56
RIF1Q5UIP0 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.57■□□□□ 0.56
RIF1Q5UIP0 MIR3687-2-201ENST00000577708 61 ntBASIC18.57■□□□□ 0.56
RIF1Q5UIP0 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RIF1Q5UIP0 MIR3687-1-201ENST00000614492 61 ntBASIC18.57■□□□□ 0.56
RIF1Q5UIP0 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.57■□□□□ 0.56
RIF1Q5UIP0 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
RIF1Q5UIP0 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RIF1Q5UIP0 GPAT2P1-201ENST00000444924 1672 ntBASIC18.56■□□□□ 0.56
RIF1Q5UIP0 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RIF1Q5UIP0 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RIF1Q5UIP0 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
RIF1Q5UIP0 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RIF1Q5UIP0 AC104109.2-201ENST00000602919 1418 ntBASIC18.56■□□□□ 0.56
RIF1Q5UIP0 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RIF1Q5UIP0 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.56■□□□□ 0.56
RIF1Q5UIP0 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.56■□□□□ 0.56
RIF1Q5UIP0 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RIF1Q5UIP0 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RIF1Q5UIP0 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
RIF1Q5UIP0 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC18.56■□□□□ 0.56
RIF1Q5UIP0 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RIF1Q5UIP0 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RIF1Q5UIP0 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RIF1Q5UIP0 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RIF1Q5UIP0 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
RIF1Q5UIP0 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RIF1Q5UIP0 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RIF1Q5UIP0 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
RIF1Q5UIP0 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
RIF1Q5UIP0 METTL21AP1-201ENST00000438852 635 ntBASIC18.56■□□□□ 0.56
RIF1Q5UIP0 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RIF1Q5UIP0 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RIF1Q5UIP0 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.56■□□□□ 0.56
RIF1Q5UIP0 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RIF1Q5UIP0 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RIF1Q5UIP0 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RIF1Q5UIP0 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RIF1Q5UIP0 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RIF1Q5UIP0 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RIF1Q5UIP0 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.55■□□□□ 0.56
RIF1Q5UIP0 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.55■□□□□ 0.56
RIF1Q5UIP0 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC18.55■□□□□ 0.56
RIF1Q5UIP0 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RIF1Q5UIP0 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RIF1Q5UIP0 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RIF1Q5UIP0 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.55■□□□□ 0.56
RIF1Q5UIP0 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RIF1Q5UIP0 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
RIF1Q5UIP0 CASK-201ENST00000378154 2494 ntTSL 5 BASIC18.55■□□□□ 0.56
RIF1Q5UIP0 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
RIF1Q5UIP0 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RIF1Q5UIP0 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC18.55■□□□□ 0.56
RIF1Q5UIP0 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RIF1Q5UIP0 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RIF1Q5UIP0 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.55■□□□□ 0.56
RIF1Q5UIP0 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC18.55■□□□□ 0.56
RIF1Q5UIP0 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
RIF1Q5UIP0 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
RIF1Q5UIP0 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
RIF1Q5UIP0 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.54■□□□□ 0.56
RIF1Q5UIP0 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
RIF1Q5UIP0 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RIF1Q5UIP0 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.54■□□□□ 0.56
RIF1Q5UIP0 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
RIF1Q5UIP0 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
RIF1Q5UIP0 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RIF1Q5UIP0 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC18.54■□□□□ 0.56
RIF1Q5UIP0 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.54■□□□□ 0.56
RIF1Q5UIP0 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RIF1Q5UIP0 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
RIF1Q5UIP0 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC18.54■□□□□ 0.56
RIF1Q5UIP0 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.54■□□□□ 0.56
RIF1Q5UIP0 ORC5-208ENST00000626700 344 ntTSL 3 BASIC18.54■□□□□ 0.56
RIF1Q5UIP0 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.54■□□□□ 0.56
RIF1Q5UIP0 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RIF1Q5UIP0 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.54■□□□□ 0.56
RIF1Q5UIP0 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.54■□□□□ 0.56
RIF1Q5UIP0 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms