Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
RUNDC3AQ59EK9 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RUNDC3AQ59EK9 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RUNDC3AQ59EK9 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.05■□□□□ 0.48
RUNDC3AQ59EK9 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.05■□□□□ 0.48
RUNDC3AQ59EK9 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.05■□□□□ 0.48
RUNDC3AQ59EK9 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.05■□□□□ 0.48
RUNDC3AQ59EK9 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RUNDC3AQ59EK9 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.05■□□□□ 0.48
RUNDC3AQ59EK9 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RUNDC3AQ59EK9 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.05■□□□□ 0.48
RUNDC3AQ59EK9 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.05■□□□□ 0.48
RUNDC3AQ59EK9 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RUNDC3AQ59EK9 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RUNDC3AQ59EK9 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RUNDC3AQ59EK9 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.05■□□□□ 0.48
RUNDC3AQ59EK9 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
RUNDC3AQ59EK9 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RUNDC3AQ59EK9 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.05■□□□□ 0.48
RUNDC3AQ59EK9 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
RUNDC3AQ59EK9 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.05■□□□□ 0.48
RUNDC3AQ59EK9 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.05■□□□□ 0.48
RUNDC3AQ59EK9 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.05■□□□□ 0.48
RUNDC3AQ59EK9 AC083906.2-201ENST00000511578 360 ntBASIC18.05■□□□□ 0.48
RUNDC3AQ59EK9 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.05■□□□□ 0.48
RUNDC3AQ59EK9 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.05■□□□□ 0.48
RUNDC3AQ59EK9 AL121832.2-201ENST00000610979 668 ntBASIC18.05■□□□□ 0.48
RUNDC3AQ59EK9 AC083906.6-201ENST00000641366 219 ntBASIC18.05■□□□□ 0.48
RUNDC3AQ59EK9 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.05■□□□□ 0.48
RUNDC3AQ59EK9 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RUNDC3AQ59EK9 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RUNDC3AQ59EK9 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RUNDC3AQ59EK9 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
RUNDC3AQ59EK9 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RUNDC3AQ59EK9 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RUNDC3AQ59EK9 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RUNDC3AQ59EK9 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.05■□□□□ 0.48
RUNDC3AQ59EK9 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.05■□□□□ 0.48
RUNDC3AQ59EK9 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
RUNDC3AQ59EK9 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
RUNDC3AQ59EK9 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RUNDC3AQ59EK9 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
RUNDC3AQ59EK9 ANO7L1-203ENST00000602586 1720 ntBASIC18.04■□□□□ 0.48
RUNDC3AQ59EK9 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RUNDC3AQ59EK9 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.04■□□□□ 0.48
RUNDC3AQ59EK9 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
RUNDC3AQ59EK9 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RUNDC3AQ59EK9 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
RUNDC3AQ59EK9 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RUNDC3AQ59EK9 AL354751.1-201ENST00000412768 1863 ntBASIC18.04■□□□□ 0.48
RUNDC3AQ59EK9 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RUNDC3AQ59EK9 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.04■□□□□ 0.48
RUNDC3AQ59EK9 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.04■□□□□ 0.48
RUNDC3AQ59EK9 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.04■□□□□ 0.48
RUNDC3AQ59EK9 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.04■□□□□ 0.48
RUNDC3AQ59EK9 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
RUNDC3AQ59EK9 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RUNDC3AQ59EK9 HLA-B-256ENST00000639848 1089 ntBASIC18.04■□□□□ 0.48
RUNDC3AQ59EK9 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RUNDC3AQ59EK9 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.04■□□□□ 0.48
RUNDC3AQ59EK9 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
RUNDC3AQ59EK9 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
RUNDC3AQ59EK9 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RUNDC3AQ59EK9 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.04■□□□□ 0.48
RUNDC3AQ59EK9 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
RUNDC3AQ59EK9 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RUNDC3AQ59EK9 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RUNDC3AQ59EK9 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RUNDC3AQ59EK9 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RUNDC3AQ59EK9 AC092368.3-202ENST00000574180 1591 ntBASIC18.04■□□□□ 0.48
RUNDC3AQ59EK9 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.04■□□□□ 0.48
RUNDC3AQ59EK9 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.04■□□□□ 0.48
RUNDC3AQ59EK9 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
RUNDC3AQ59EK9 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RUNDC3AQ59EK9 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RUNDC3AQ59EK9 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RUNDC3AQ59EK9 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
RUNDC3AQ59EK9 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
RUNDC3AQ59EK9 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
RUNDC3AQ59EK9 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RUNDC3AQ59EK9 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
RUNDC3AQ59EK9 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.03■□□□□ 0.48
RUNDC3AQ59EK9 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.03■□□□□ 0.48
RUNDC3AQ59EK9 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.03■□□□□ 0.48
RUNDC3AQ59EK9 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.03■□□□□ 0.48
RUNDC3AQ59EK9 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
RUNDC3AQ59EK9 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.03■□□□□ 0.48
RUNDC3AQ59EK9 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RUNDC3AQ59EK9 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.03■□□□□ 0.48
RUNDC3AQ59EK9 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.03■□□□□ 0.48
RUNDC3AQ59EK9 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.03■□□□□ 0.48
RUNDC3AQ59EK9 AC120498.8-201ENST00000614275 531 ntBASIC18.03■□□□□ 0.48
RUNDC3AQ59EK9 AL121829.2-201ENST00000620908 328 ntBASIC18.03■□□□□ 0.48
RUNDC3AQ59EK9 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.03■□□□□ 0.48
RUNDC3AQ59EK9 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RUNDC3AQ59EK9 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
RUNDC3AQ59EK9 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
RUNDC3AQ59EK9 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RUNDC3AQ59EK9 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.02■□□□□ 0.48
RUNDC3AQ59EK9 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms