Protein–RNA interactions for Protein: Q53EL6

PDCD4, Programmed cell death protein 4, humanhuman

Known RBP Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4Q53EL6 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
PDCD4Q53EL6 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.36■□□□□ 0.53
PDCD4Q53EL6 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PDCD4Q53EL6 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.36■□□□□ 0.53
PDCD4Q53EL6 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
PDCD4Q53EL6 AL390961.4-201ENST00000623958 2535 ntBASIC18.35■□□□□ 0.53
PDCD4Q53EL6 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.35■□□□□ 0.53
PDCD4Q53EL6 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
PDCD4Q53EL6 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDCD4Q53EL6 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDCD4Q53EL6 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDCD4Q53EL6 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
PDCD4Q53EL6 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.35■□□□□ 0.53
PDCD4Q53EL6 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
PDCD4Q53EL6 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
PDCD4Q53EL6 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDCD4Q53EL6 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
PDCD4Q53EL6 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDCD4Q53EL6 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PDCD4Q53EL6 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
PDCD4Q53EL6 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.35■□□□□ 0.53
PDCD4Q53EL6 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PDCD4Q53EL6 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.35■□□□□ 0.53
PDCD4Q53EL6 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.35■□□□□ 0.53
PDCD4Q53EL6 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDCD4Q53EL6 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.35■□□□□ 0.53
PDCD4Q53EL6 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDCD4Q53EL6 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDCD4Q53EL6 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDCD4Q53EL6 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDCD4Q53EL6 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.35■□□□□ 0.53
PDCD4Q53EL6 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDCD4Q53EL6 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.34■□□□□ 0.53
PDCD4Q53EL6 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDCD4Q53EL6 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.34■□□□□ 0.53
PDCD4Q53EL6 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.34■□□□□ 0.53
PDCD4Q53EL6 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDCD4Q53EL6 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDCD4Q53EL6 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDCD4Q53EL6 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDCD4Q53EL6 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDCD4Q53EL6 TUBB8P6-201ENST00000436895 1288 ntBASIC18.34■□□□□ 0.53
PDCD4Q53EL6 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.34■□□□□ 0.53
PDCD4Q53EL6 AC083906.6-201ENST00000641366 219 ntBASIC18.34■□□□□ 0.53
PDCD4Q53EL6 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
PDCD4Q53EL6 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.34■□□□□ 0.53
PDCD4Q53EL6 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.34■□□□□ 0.53
PDCD4Q53EL6 AP000997.3-201ENST00000623333 2250 ntBASIC18.34■□□□□ 0.53
PDCD4Q53EL6 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
PDCD4Q53EL6 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDCD4Q53EL6 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDCD4Q53EL6 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
PDCD4Q53EL6 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
PDCD4Q53EL6 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.33■□□□□ 0.53
PDCD4Q53EL6 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PDCD4Q53EL6 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PDCD4Q53EL6 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
PDCD4Q53EL6 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
PDCD4Q53EL6 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PDCD4Q53EL6 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.53
PDCD4Q53EL6 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.33■□□□□ 0.53
PDCD4Q53EL6 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PDCD4Q53EL6 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PDCD4Q53EL6 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PDCD4Q53EL6 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PDCD4Q53EL6 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
PDCD4Q53EL6 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PDCD4Q53EL6 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.33■□□□□ 0.52
PDCD4Q53EL6 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.33■□□□□ 0.52
PDCD4Q53EL6 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PDCD4Q53EL6 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.33■□□□□ 0.52
PDCD4Q53EL6 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.33■□□□□ 0.52
PDCD4Q53EL6 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.33■□□□□ 0.52
PDCD4Q53EL6 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PDCD4Q53EL6 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PDCD4Q53EL6 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PDCD4Q53EL6 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.33■□□□□ 0.52
PDCD4Q53EL6 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
PDCD4Q53EL6 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PDCD4Q53EL6 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PDCD4Q53EL6 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PDCD4Q53EL6 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDCD4Q53EL6 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.32■□□□□ 0.52
PDCD4Q53EL6 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDCD4Q53EL6 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDCD4Q53EL6 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDCD4Q53EL6 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.32■□□□□ 0.52
PDCD4Q53EL6 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDCD4Q53EL6 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
PDCD4Q53EL6 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.32■□□□□ 0.52
PDCD4Q53EL6 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
PDCD4Q53EL6 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDCD4Q53EL6 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.32■□□□□ 0.52
PDCD4Q53EL6 PARL-206ENST00000435888 1098 ntTSL 5 BASIC18.32■□□□□ 0.52
PDCD4Q53EL6 CROCCP5-201ENST00000436658 830 ntBASIC18.32■□□□□ 0.52
PDCD4Q53EL6 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.32■□□□□ 0.52
PDCD4Q53EL6 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.32■□□□□ 0.52
PDCD4Q53EL6 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.32■□□□□ 0.52
PDCD4Q53EL6 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.32■□□□□ 0.52
PDCD4Q53EL6 AL121832.2-201ENST00000610979 668 ntBASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms