Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 AC068880.1-201ENST00000507289 2297 ntBASIC17.79■□□□□ 0.44
RFX4Q33E94 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RFX4Q33E94 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RFX4Q33E94 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
RFX4Q33E94 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
RFX4Q33E94 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RFX4Q33E94 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.79■□□□□ 0.44
RFX4Q33E94 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.79■□□□□ 0.44
RFX4Q33E94 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.78■□□□□ 0.44
RFX4Q33E94 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
RFX4Q33E94 KRT17P1-201ENST00000399211 1546 ntBASIC17.78■□□□□ 0.44
RFX4Q33E94 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.78■□□□□ 0.44
RFX4Q33E94 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
RFX4Q33E94 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RFX4Q33E94 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
RFX4Q33E94 METTL26-203ENST00000397664 604 ntTSL 2 BASIC17.78■□□□□ 0.44
RFX4Q33E94 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC17.78■□□□□ 0.44
RFX4Q33E94 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC17.78■□□□□ 0.44
RFX4Q33E94 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
RFX4Q33E94 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.78■□□□□ 0.44
RFX4Q33E94 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.78■□□□□ 0.44
RFX4Q33E94 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RFX4Q33E94 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.78■□□□□ 0.44
RFX4Q33E94 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.78■□□□□ 0.44
RFX4Q33E94 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RFX4Q33E94 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
RFX4Q33E94 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.77■□□□□ 0.44
RFX4Q33E94 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
RFX4Q33E94 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RFX4Q33E94 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
RFX4Q33E94 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RFX4Q33E94 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.77■□□□□ 0.44
RFX4Q33E94 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC17.77■□□□□ 0.44
RFX4Q33E94 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
RFX4Q33E94 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
RFX4Q33E94 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.77■□□□□ 0.44
RFX4Q33E94 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
RFX4Q33E94 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.77■□□□□ 0.44
RFX4Q33E94 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.77■□□□□ 0.44
RFX4Q33E94 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
RFX4Q33E94 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RFX4Q33E94 AC093787.1-201ENST00000450396 207 ntBASIC17.77■□□□□ 0.44
RFX4Q33E94 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RFX4Q33E94 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RFX4Q33E94 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC17.77■□□□□ 0.44
RFX4Q33E94 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC17.77■□□□□ 0.44
RFX4Q33E94 MAZ-216ENST00000616501 991 ntTSL 5 BASIC17.77■□□□□ 0.44
RFX4Q33E94 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.77■□□□□ 0.44
RFX4Q33E94 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.77■□□□□ 0.44
RFX4Q33E94 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.43
RFX4Q33E94 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
RFX4Q33E94 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC17.77■□□□□ 0.43
RFX4Q33E94 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RFX4Q33E94 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
RFX4Q33E94 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.43
RFX4Q33E94 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
RFX4Q33E94 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RFX4Q33E94 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RFX4Q33E94 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RFX4Q33E94 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RFX4Q33E94 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.76■□□□□ 0.43
RFX4Q33E94 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RFX4Q33E94 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RFX4Q33E94 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RFX4Q33E94 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RFX4Q33E94 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.76■□□□□ 0.43
RFX4Q33E94 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
RFX4Q33E94 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RFX4Q33E94 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RFX4Q33E94 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RFX4Q33E94 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RFX4Q33E94 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RFX4Q33E94 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
RFX4Q33E94 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.76■□□□□ 0.43
RFX4Q33E94 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RFX4Q33E94 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RFX4Q33E94 AC018553.1-201ENST00000616682 1458 ntBASIC17.75■□□□□ 0.43
RFX4Q33E94 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RFX4Q33E94 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RFX4Q33E94 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RFX4Q33E94 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RFX4Q33E94 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RFX4Q33E94 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
RFX4Q33E94 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.75■□□□□ 0.43
RFX4Q33E94 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
RFX4Q33E94 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RFX4Q33E94 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.75■□□□□ 0.43
RFX4Q33E94 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
RFX4Q33E94 ABALON-201ENST00000629058 1903 ntBASIC17.75■□□□□ 0.43
RFX4Q33E94 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.75■□□□□ 0.43
RFX4Q33E94 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.75■□□□□ 0.43
RFX4Q33E94 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RFX4Q33E94 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
RFX4Q33E94 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC17.75■□□□□ 0.43
RFX4Q33E94 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC17.75■□□□□ 0.43
RFX4Q33E94 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC17.75■□□□□ 0.43
RFX4Q33E94 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC17.75■□□□□ 0.43
RFX4Q33E94 MIR5787-201ENST00000611784 55 ntBASIC17.75■□□□□ 0.43
RFX4Q33E94 ANKRD20A6P-201ENST00000618763 204 ntBASIC17.75■□□□□ 0.43
RFX4Q33E94 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms