Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
HSPG2P98160 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC11.86□□□□□ -0.51
HSPG2P98160 AC104109.2-201ENST00000602919 1418 ntBASIC11.86□□□□□ -0.51
HSPG2P98160 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
HSPG2P98160 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
HSPG2P98160 DNAJB3-202ENST00000449667 1266 ntBASIC11.86□□□□□ -0.51
HSPG2P98160 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC11.86□□□□□ -0.51
HSPG2P98160 SART3-203ENST00000546611 1184 ntBASIC11.86□□□□□ -0.51
HSPG2P98160 BNIP3P18-201ENST00000593976 575 ntBASIC11.86□□□□□ -0.51
HSPG2P98160 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
HSPG2P98160 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC11.86□□□□□ -0.51
HSPG2P98160 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
HSPG2P98160 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
HSPG2P98160 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
HSPG2P98160 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
HSPG2P98160 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
HSPG2P98160 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
HSPG2P98160 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC11.86□□□□□ -0.51
HSPG2P98160 LBH-203ENST00000404397 543 ntTSL 4 BASIC11.86□□□□□ -0.51
HSPG2P98160 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
HSPG2P98160 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC11.86□□□□□ -0.51
HSPG2P98160 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC11.86□□□□□ -0.51
HSPG2P98160 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC11.86□□□□□ -0.51
HSPG2P98160 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC11.86□□□□□ -0.51
HSPG2P98160 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC11.86□□□□□ -0.51
HSPG2P98160 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC11.86□□□□□ -0.51
HSPG2P98160 AL592071.1-201ENST00000611956 408 ntBASIC11.86□□□□□ -0.51
HSPG2P98160 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
HSPG2P98160 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
HSPG2P98160 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
HSPG2P98160 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
HSPG2P98160 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC11.86□□□□□ -0.51
HSPG2P98160 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC11.86□□□□□ -0.51
HSPG2P98160 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
HSPG2P98160 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC11.86□□□□□ -0.51
HSPG2P98160 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
HSPG2P98160 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC11.86□□□□□ -0.51
HSPG2P98160 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
HSPG2P98160 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
HSPG2P98160 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
HSPG2P98160 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
HSPG2P98160 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC11.85□□□□□ -0.51
HSPG2P98160 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
HSPG2P98160 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
HSPG2P98160 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
HSPG2P98160 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
HSPG2P98160 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
HSPG2P98160 HNRNPDP1-201ENST00000439535 754 ntBASIC11.85□□□□□ -0.51
HSPG2P98160 CCDC74BP1-201ENST00000508880 1123 ntBASIC11.85□□□□□ -0.51
HSPG2P98160 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
HSPG2P98160 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
HSPG2P98160 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC11.85□□□□□ -0.51
HSPG2P98160 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
HSPG2P98160 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
HSPG2P98160 CYMP-203ENST00000474680 1263 ntBASIC11.85□□□□□ -0.51
HSPG2P98160 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
HSPG2P98160 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC11.85□□□□□ -0.51
HSPG2P98160 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC11.85□□□□□ -0.51
HSPG2P98160 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
HSPG2P98160 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
HSPG2P98160 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
HSPG2P98160 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC11.85□□□□□ -0.51
HSPG2P98160 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC11.85□□□□□ -0.51
HSPG2P98160 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
HSPG2P98160 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC11.85□□□□□ -0.51
HSPG2P98160 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
HSPG2P98160 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC11.85□□□□□ -0.51
HSPG2P98160 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
HSPG2P98160 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
HSPG2P98160 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC11.85□□□□□ -0.51
HSPG2P98160 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC11.85□□□□□ -0.51
HSPG2P98160 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC11.85□□□□□ -0.51
HSPG2P98160 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC11.85□□□□□ -0.51
HSPG2P98160 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
HSPG2P98160 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
HSPG2P98160 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
HSPG2P98160 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC11.84□□□□□ -0.51
HSPG2P98160 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
HSPG2P98160 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
HSPG2P98160 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC11.84□□□□□ -0.51
HSPG2P98160 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
HSPG2P98160 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
HSPG2P98160 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC11.84□□□□□ -0.51
HSPG2P98160 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC11.84□□□□□ -0.51
HSPG2P98160 UPF3AP3-201ENST00000420996 769 ntBASIC11.84□□□□□ -0.51
HSPG2P98160 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC11.84□□□□□ -0.51
HSPG2P98160 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC11.84□□□□□ -0.51
HSPG2P98160 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC11.84□□□□□ -0.51
HSPG2P98160 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC11.84□□□□□ -0.51
HSPG2P98160 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
HSPG2P98160 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
HSPG2P98160 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
HSPG2P98160 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
HSPG2P98160 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
HSPG2P98160 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
HSPG2P98160 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC11.84□□□□□ -0.51
HSPG2P98160 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
HSPG2P98160 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
HSPG2P98160 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
HSPG2P98160 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms