Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
RPS28P62857 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC11.11□□□□□ -0.63
RPS28P62857 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC11.11□□□□□ -0.63
RPS28P62857 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
RPS28P62857 AC092171.3-201ENST00000610122 2651 ntBASIC11.11□□□□□ -0.63
RPS28P62857 SLC9A3P3-201ENST00000457608 2229 ntBASIC11.11□□□□□ -0.63
RPS28P62857 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
RPS28P62857 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC11.11□□□□□ -0.63
RPS28P62857 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
RPS28P62857 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC11.1□□□□□ -0.63
RPS28P62857 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC11.1□□□□□ -0.63
RPS28P62857 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
RPS28P62857 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
RPS28P62857 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
RPS28P62857 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
RPS28P62857 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
RPS28P62857 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
RPS28P62857 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
RPS28P62857 AC006333.2-201ENST00000607957 2099 ntBASIC11.1□□□□□ -0.63
RPS28P62857 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
RPS28P62857 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
RPS28P62857 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
RPS28P62857 GNE-204ENST00000539208 2190 ntTSL 2 BASIC11.1□□□□□ -0.63
RPS28P62857 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
RPS28P62857 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
RPS28P62857 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
RPS28P62857 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
RPS28P62857 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
RPS28P62857 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC11.1□□□□□ -0.63
RPS28P62857 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
RPS28P62857 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC11.1□□□□□ -0.63
RPS28P62857 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
RPS28P62857 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
RPS28P62857 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
RPS28P62857 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC11.1□□□□□ -0.63
RPS28P62857 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
RPS28P62857 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
RPS28P62857 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
RPS28P62857 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
RPS28P62857 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
RPS28P62857 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
RPS28P62857 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
RPS28P62857 AL009178.2-201ENST00000597278 2719 ntBASIC11.1□□□□□ -0.63
RPS28P62857 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
RPS28P62857 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC11.1□□□□□ -0.63
RPS28P62857 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC11.1□□□□□ -0.63
RPS28P62857 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC11.1□□□□□ -0.63
RPS28P62857 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC11.1□□□□□ -0.63
RPS28P62857 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC11.1□□□□□ -0.63
RPS28P62857 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
RPS28P62857 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
RPS28P62857 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC11.1□□□□□ -0.63
RPS28P62857 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC11.1□□□□□ -0.63
RPS28P62857 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
RPS28P62857 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
RPS28P62857 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
RPS28P62857 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
RPS28P62857 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC11.1□□□□□ -0.63
RPS28P62857 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
RPS28P62857 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RPS28P62857 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
RPS28P62857 STK25-204ENST00000405585 1643 ntTSL 2 BASIC11.09□□□□□ -0.63
RPS28P62857 AC004687.1-201ENST00000579003 1625 ntBASIC11.09□□□□□ -0.63
RPS28P62857 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
RPS28P62857 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC11.09□□□□□ -0.63
RPS28P62857 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC11.09□□□□□ -0.63
RPS28P62857 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC11.09□□□□□ -0.63
RPS28P62857 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RPS28P62857 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
RPS28P62857 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC11.09□□□□□ -0.63
RPS28P62857 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
RPS28P62857 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
RPS28P62857 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RPS28P62857 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC11.09□□□□□ -0.63
RPS28P62857 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
RPS28P62857 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
RPS28P62857 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RPS28P62857 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
RPS28P62857 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
RPS28P62857 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
RPS28P62857 AL603756.1-201ENST00000606511 2163 ntBASIC11.09□□□□□ -0.63
RPS28P62857 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
RPS28P62857 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
RPS28P62857 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC11.09□□□□□ -0.63
RPS28P62857 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC11.09□□□□□ -0.63
RPS28P62857 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
RPS28P62857 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC11.09□□□□□ -0.63
RPS28P62857 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RPS28P62857 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RPS28P62857 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RPS28P62857 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC11.09□□□□□ -0.63
RPS28P62857 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RPS28P62857 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
RPS28P62857 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
RPS28P62857 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RPS28P62857 PRAL-201ENST00000624952 3286 ntBASIC11.09□□□□□ -0.63
RPS28P62857 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RPS28P62857 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RPS28P62857 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
RPS28P62857 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms