Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.99■□□□□ 0.47
RAB38P57729 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RAB38P57729 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.99■□□□□ 0.47
RAB38P57729 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.99■□□□□ 0.47
RAB38P57729 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RAB38P57729 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RAB38P57729 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RAB38P57729 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RAB38P57729 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC17.99■□□□□ 0.47
RAB38P57729 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.98■□□□□ 0.47
RAB38P57729 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RAB38P57729 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RAB38P57729 IRX1P1-201ENST00000438849 1838 ntBASIC17.98■□□□□ 0.47
RAB38P57729 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.98■□□□□ 0.47
RAB38P57729 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
RAB38P57729 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RAB38P57729 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RAB38P57729 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RAB38P57729 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.98■□□□□ 0.47
RAB38P57729 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.98■□□□□ 0.47
RAB38P57729 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.98■□□□□ 0.47
RAB38P57729 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.98■□□□□ 0.47
RAB38P57729 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RAB38P57729 FITM1-202ENST00000559294 800 ntBASIC17.98■□□□□ 0.47
RAB38P57729 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.98■□□□□ 0.47
RAB38P57729 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RAB38P57729 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RAB38P57729 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RAB38P57729 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.98■□□□□ 0.47
RAB38P57729 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RAB38P57729 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RAB38P57729 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RAB38P57729 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RAB38P57729 FEM1AP3-201ENST00000403722 1741 ntBASIC17.98■□□□□ 0.47
RAB38P57729 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RAB38P57729 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RAB38P57729 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.97■□□□□ 0.47
RAB38P57729 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RAB38P57729 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
RAB38P57729 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RAB38P57729 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RAB38P57729 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.97■□□□□ 0.47
RAB38P57729 FP475955.4-201ENST00000623131 1990 ntBASIC17.97■□□□□ 0.47
RAB38P57729 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
RAB38P57729 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RAB38P57729 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RAB38P57729 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.97■□□□□ 0.47
RAB38P57729 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.97■□□□□ 0.47
RAB38P57729 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.97■□□□□ 0.47
RAB38P57729 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RAB38P57729 MIR1238-201ENST00000408483 83 ntBASIC17.97■□□□□ 0.47
RAB38P57729 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.97■□□□□ 0.47
RAB38P57729 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.97■□□□□ 0.47
RAB38P57729 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.97■□□□□ 0.47
RAB38P57729 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
RAB38P57729 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.97■□□□□ 0.47
RAB38P57729 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.97■□□□□ 0.47
RAB38P57729 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RAB38P57729 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RAB38P57729 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
RAB38P57729 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RAB38P57729 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RAB38P57729 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.97■□□□□ 0.47
RAB38P57729 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.97■□□□□ 0.47
RAB38P57729 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RAB38P57729 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RAB38P57729 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RAB38P57729 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
RAB38P57729 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
RAB38P57729 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.96■□□□□ 0.47
RAB38P57729 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RAB38P57729 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RAB38P57729 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
RAB38P57729 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RAB38P57729 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
RAB38P57729 AL390955.1-201ENST00000428694 934 ntBASIC17.96■□□□□ 0.47
RAB38P57729 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.96■□□□□ 0.47
RAB38P57729 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RAB38P57729 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RAB38P57729 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
RAB38P57729 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
RAB38P57729 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
RAB38P57729 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RAB38P57729 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.96■□□□□ 0.47
RAB38P57729 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
RAB38P57729 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
RAB38P57729 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
RAB38P57729 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.96■□□□□ 0.47
RAB38P57729 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
RAB38P57729 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
RAB38P57729 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.46
RAB38P57729 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
RAB38P57729 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.95■□□□□ 0.46
RAB38P57729 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAB38P57729 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAB38P57729 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAB38P57729 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.95■□□□□ 0.46
RAB38P57729 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.95■□□□□ 0.46
RAB38P57729 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
RAB38P57729 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms