Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN6P56747 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.35■□□□□ 0.53
CLDN6P56747 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.35■□□□□ 0.53
CLDN6P56747 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.35■□□□□ 0.53
CLDN6P56747 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CLDN6P56747 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN6P56747 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN6P56747 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CLDN6P56747 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLDN6P56747 AP001271.2-201ENST00000624018 1556 ntBASIC18.34■□□□□ 0.53
CLDN6P56747 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLDN6P56747 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLDN6P56747 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLDN6P56747 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLDN6P56747 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLDN6P56747 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLDN6P56747 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLDN6P56747 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLDN6P56747 HBZP1-201ENST00000354915 429 ntBASIC18.34■□□□□ 0.53
CLDN6P56747 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLDN6P56747 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.34■□□□□ 0.53
CLDN6P56747 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLDN6P56747 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLDN6P56747 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.34■□□□□ 0.53
CLDN6P56747 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.34■□□□□ 0.53
CLDN6P56747 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLDN6P56747 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.34■□□□□ 0.53
CLDN6P56747 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLDN6P56747 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLDN6P56747 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLDN6P56747 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.34■□□□□ 0.53
CLDN6P56747 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLDN6P56747 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CLDN6P56747 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CLDN6P56747 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CLDN6P56747 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.53
CLDN6P56747 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.33■□□□□ 0.53
CLDN6P56747 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
CLDN6P56747 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CLDN6P56747 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CLDN6P56747 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLDN6P56747 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.33■□□□□ 0.52
CLDN6P56747 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC18.33■□□□□ 0.52
CLDN6P56747 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CLDN6P56747 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLDN6P56747 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CLDN6P56747 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLDN6P56747 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.33■□□□□ 0.52
CLDN6P56747 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CLDN6P56747 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC18.33■□□□□ 0.52
CLDN6P56747 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.33■□□□□ 0.52
CLDN6P56747 NEK4P2-201ENST00000580004 1012 ntBASIC18.33■□□□□ 0.52
CLDN6P56747 AC092329.2-201ENST00000598402 547 ntBASIC18.33■□□□□ 0.52
CLDN6P56747 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CLDN6P56747 CR769767.2-201ENST00000622735 460 ntBASIC18.33■□□□□ 0.52
CLDN6P56747 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CLDN6P56747 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLDN6P56747 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.33■□□□□ 0.52
CLDN6P56747 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLDN6P56747 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLDN6P56747 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CLDN6P56747 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLDN6P56747 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
CLDN6P56747 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.33■□□□□ 0.52
CLDN6P56747 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.33■□□□□ 0.52
CLDN6P56747 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.33■□□□□ 0.52
CLDN6P56747 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CLDN6P56747 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLDN6P56747 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
CLDN6P56747 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CLDN6P56747 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CLDN6P56747 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.32■□□□□ 0.52
CLDN6P56747 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLDN6P56747 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLDN6P56747 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLDN6P56747 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLDN6P56747 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLDN6P56747 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLDN6P56747 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CLDN6P56747 FDX1P1-201ENST00000449115 551 ntBASIC18.32■□□□□ 0.52
CLDN6P56747 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC18.32■□□□□ 0.52
CLDN6P56747 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.32■□□□□ 0.52
CLDN6P56747 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.32■□□□□ 0.52
CLDN6P56747 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLDN6P56747 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CLDN6P56747 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLDN6P56747 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.32■□□□□ 0.52
CLDN6P56747 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CLDN6P56747 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLDN6P56747 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CLDN6P56747 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CLDN6P56747 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLDN6P56747 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CLDN6P56747 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.31■□□□□ 0.52
CLDN6P56747 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLDN6P56747 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLDN6P56747 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CLDN6P56747 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CLDN6P56747 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CLDN6P56747 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms