Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
CLTCL1P53675 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC27.39■■□□□ 1.98
CLTCL1P53675 IPPK-202ENST00000375522 882 ntTSL 3 BASIC27.39■■□□□ 1.98
CLTCL1P53675 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC27.39■■□□□ 1.98
CLTCL1P53675 MCCD1P1-208ENST00000445732 328 ntBASIC27.39■■□□□ 1.98
CLTCL1P53675 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC27.39■■□□□ 1.98
CLTCL1P53675 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC27.39■■□□□ 1.98
CLTCL1P53675 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC27.39■■□□□ 1.98
CLTCL1P53675 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
CLTCL1P53675 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
CLTCL1P53675 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC27.39■■□□□ 1.97
CLTCL1P53675 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC27.39■■□□□ 1.97
CLTCL1P53675 KRT8P3-201ENST00000519669 1449 ntBASIC27.39■■□□□ 1.97
CLTCL1P53675 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC27.39■■□□□ 1.97
CLTCL1P53675 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
CLTCL1P53675 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC27.39■■□□□ 1.97
CLTCL1P53675 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC27.39■■□□□ 1.97
CLTCL1P53675 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC27.38■■□□□ 1.97
CLTCL1P53675 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC27.38■■□□□ 1.97
CLTCL1P53675 AL450487.1-201ENST00000426799 995 ntBASIC27.38■■□□□ 1.97
CLTCL1P53675 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
CLTCL1P53675 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC27.38■■□□□ 1.97
CLTCL1P53675 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC27.38■■□□□ 1.97
CLTCL1P53675 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC27.38■■□□□ 1.97
CLTCL1P53675 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC27.38■■□□□ 1.97
CLTCL1P53675 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
CLTCL1P53675 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC27.38■■□□□ 1.97
CLTCL1P53675 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC27.38■■□□□ 1.97
CLTCL1P53675 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC27.38■■□□□ 1.97
CLTCL1P53675 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
CLTCL1P53675 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
CLTCL1P53675 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC27.38■■□□□ 1.97
CLTCL1P53675 AC079602.3-201ENST00000623931 403 ntBASIC27.38■■□□□ 1.97
CLTCL1P53675 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
CLTCL1P53675 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
CLTCL1P53675 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC27.37■■□□□ 1.97
CLTCL1P53675 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC27.37■■□□□ 1.97
CLTCL1P53675 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
CLTCL1P53675 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
CLTCL1P53675 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC27.37■■□□□ 1.97
CLTCL1P53675 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
CLTCL1P53675 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC27.37■■□□□ 1.97
CLTCL1P53675 AC024243.1-201ENST00000609234 778 ntBASIC27.37■■□□□ 1.97
CLTCL1P53675 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC27.37■■□□□ 1.97
CLTCL1P53675 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC27.37■■□□□ 1.97
CLTCL1P53675 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC27.36■■□□□ 1.97
CLTCL1P53675 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC27.36■■□□□ 1.97
CLTCL1P53675 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
CLTCL1P53675 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
CLTCL1P53675 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC27.36■■□□□ 1.97
CLTCL1P53675 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
CLTCL1P53675 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC27.36■■□□□ 1.97
CLTCL1P53675 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC27.36■■□□□ 1.97
CLTCL1P53675 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC27.36■■□□□ 1.97
CLTCL1P53675 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
CLTCL1P53675 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC27.36■■□□□ 1.97
CLTCL1P53675 AC034232.1-201ENST00000506026 1064 ntBASIC27.36■■□□□ 1.97
CLTCL1P53675 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC27.36■■□□□ 1.97
CLTCL1P53675 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC27.36■■□□□ 1.97
CLTCL1P53675 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC27.36■■□□□ 1.97
CLTCL1P53675 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC27.36■■□□□ 1.97
CLTCL1P53675 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
CLTCL1P53675 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
CLTCL1P53675 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
CLTCL1P53675 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
CLTCL1P53675 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
CLTCL1P53675 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC27.35■■□□□ 1.97
CLTCL1P53675 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC27.35■■□□□ 1.97
CLTCL1P53675 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC27.35■■□□□ 1.97
CLTCL1P53675 AL157888.1-201ENST00000631930 593 ntBASIC27.35■■□□□ 1.97
CLTCL1P53675 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC27.35■■□□□ 1.97
CLTCL1P53675 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
CLTCL1P53675 AC093525.10-201ENST00000625130 1569 ntBASIC27.35■■□□□ 1.97
CLTCL1P53675 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC27.35■■□□□ 1.97
CLTCL1P53675 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
CLTCL1P53675 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC27.35■■□□□ 1.97
CLTCL1P53675 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC27.35■■□□□ 1.97
CLTCL1P53675 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
CLTCL1P53675 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
CLTCL1P53675 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
CLTCL1P53675 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
CLTCL1P53675 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
CLTCL1P53675 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC27.34■■□□□ 1.97
CLTCL1P53675 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
CLTCL1P53675 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC27.34■■□□□ 1.97
CLTCL1P53675 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC27.34■■□□□ 1.97
CLTCL1P53675 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC27.34■■□□□ 1.97
CLTCL1P53675 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC27.34■■□□□ 1.97
CLTCL1P53675 BCL10-202ENST00000620248 774 ntTSL 5 BASIC27.34■■□□□ 1.97
CLTCL1P53675 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC27.34■■□□□ 1.97
CLTCL1P53675 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC27.34■■□□□ 1.97
CLTCL1P53675 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC27.34■■□□□ 1.97
CLTCL1P53675 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
CLTCL1P53675 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
CLTCL1P53675 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC27.34■■□□□ 1.97
CLTCL1P53675 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
CLTCL1P53675 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC27.34■■□□□ 1.97
CLTCL1P53675 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC27.34■■□□□ 1.97
CLTCL1P53675 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
CLTCL1P53675 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC27.34■■□□□ 1.97
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms