Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLCNKAP51800 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.75■□□□□ 0.59
CLCNKAP51800 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLCNKAP51800 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CLCNKAP51800 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLCNKAP51800 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLCNKAP51800 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLCNKAP51800 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.75■□□□□ 0.59
CLCNKAP51800 FAM210CP-201ENST00000445714 574 ntBASIC18.75■□□□□ 0.59
CLCNKAP51800 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.75■□□□□ 0.59
CLCNKAP51800 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.75■□□□□ 0.59
CLCNKAP51800 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.75■□□□□ 0.59
CLCNKAP51800 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLCNKAP51800 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.75■□□□□ 0.59
CLCNKAP51800 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLCNKAP51800 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CLCNKAP51800 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.74■□□□□ 0.59
CLCNKAP51800 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLCNKAP51800 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.74■□□□□ 0.59
CLCNKAP51800 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.74■□□□□ 0.59
CLCNKAP51800 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLCNKAP51800 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CLCNKAP51800 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.74■□□□□ 0.59
CLCNKAP51800 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.74■□□□□ 0.59
CLCNKAP51800 CCR12P-201ENST00000446203 998 ntBASIC18.74■□□□□ 0.59
CLCNKAP51800 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.74■□□□□ 0.59
CLCNKAP51800 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
CLCNKAP51800 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.74■□□□□ 0.59
CLCNKAP51800 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLCNKAP51800 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.74■□□□□ 0.59
CLCNKAP51800 AC005363.2-201ENST00000618631 242 ntBASIC18.74■□□□□ 0.59
CLCNKAP51800 AC116562.4-202ENST00000641738 218 ntBASIC18.74■□□□□ 0.59
CLCNKAP51800 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
CLCNKAP51800 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLCNKAP51800 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CLCNKAP51800 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLCNKAP51800 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CLCNKAP51800 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.74■□□□□ 0.59
CLCNKAP51800 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.74■□□□□ 0.59
CLCNKAP51800 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.73■□□□□ 0.59
CLCNKAP51800 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.73■□□□□ 0.59
CLCNKAP51800 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CLCNKAP51800 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.73■□□□□ 0.59
CLCNKAP51800 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
CLCNKAP51800 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLCNKAP51800 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLCNKAP51800 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLCNKAP51800 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
CLCNKAP51800 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.73■□□□□ 0.59
CLCNKAP51800 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.73■□□□□ 0.59
CLCNKAP51800 AL023803.3-201ENST00000615559 522 ntBASIC18.73■□□□□ 0.59
CLCNKAP51800 AC010653.2-201ENST00000623505 997 ntBASIC18.73■□□□□ 0.59
CLCNKAP51800 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.73■□□□□ 0.59
CLCNKAP51800 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CLCNKAP51800 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLCNKAP51800 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLCNKAP51800 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CLCNKAP51800 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CLCNKAP51800 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLCNKAP51800 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.72■□□□□ 0.59
CLCNKAP51800 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.72■□□□□ 0.59
CLCNKAP51800 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLCNKAP51800 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLCNKAP51800 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLCNKAP51800 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLCNKAP51800 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLCNKAP51800 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLCNKAP51800 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CLCNKAP51800 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CLCNKAP51800 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CLCNKAP51800 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.72■□□□□ 0.59
CLCNKAP51800 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CLCNKAP51800 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLCNKAP51800 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLCNKAP51800 TSPY17P-201ENST00000450329 467 ntBASIC18.72■□□□□ 0.59
CLCNKAP51800 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.72■□□□□ 0.59
CLCNKAP51800 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CLCNKAP51800 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLCNKAP51800 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLCNKAP51800 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.72■□□□□ 0.59
CLCNKAP51800 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLCNKAP51800 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLCNKAP51800 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLCNKAP51800 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLCNKAP51800 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLCNKAP51800 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CLCNKAP51800 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.71■□□□□ 0.59
CLCNKAP51800 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLCNKAP51800 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.71■□□□□ 0.59
CLCNKAP51800 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLCNKAP51800 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLCNKAP51800 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLCNKAP51800 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.71■□□□□ 0.59
CLCNKAP51800 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLCNKAP51800 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.71■□□□□ 0.59
CLCNKAP51800 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.71■□□□□ 0.59
CLCNKAP51800 AC113347.1-201ENST00000413321 391 ntBASIC18.71■□□□□ 0.59
CLCNKAP51800 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.71■□□□□ 0.59
CLCNKAP51800 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.71■□□□□ 0.59
CLCNKAP51800 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms