Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDK7P50613 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDK7P50613 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CDK7P50613 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC21.12■□□□□ 0.97
CDK7P50613 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDK7P50613 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDK7P50613 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDK7P50613 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDK7P50613 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.11■□□□□ 0.97
CDK7P50613 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CDK7P50613 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC21.11■□□□□ 0.97
CDK7P50613 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDK7P50613 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDK7P50613 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CDK7P50613 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.11■□□□□ 0.97
CDK7P50613 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CDK7P50613 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
CDK7P50613 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC21.11■□□□□ 0.97
CDK7P50613 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDK7P50613 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC21.11■□□□□ 0.97
CDK7P50613 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDK7P50613 UNC93B7-201ENST00000509439 705 ntBASIC21.11■□□□□ 0.97
CDK7P50613 PRELID1P1-202ENST00000567272 903 ntBASIC21.11■□□□□ 0.97
CDK7P50613 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC21.11■□□□□ 0.97
CDK7P50613 AC011498.5-201ENST00000592027 486 ntBASIC21.11■□□□□ 0.97
CDK7P50613 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDK7P50613 KLK8-205ENST00000593490 267 ntTSL 3 BASIC21.11■□□□□ 0.97
CDK7P50613 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CDK7P50613 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC21.11■□□□□ 0.97
CDK7P50613 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDK7P50613 ME2-216ENST00000639850 2331 ntTSL 5 BASIC21.11■□□□□ 0.97
CDK7P50613 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDK7P50613 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
CDK7P50613 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
CDK7P50613 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC21.11■□□□□ 0.97
CDK7P50613 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC21.11■□□□□ 0.97
CDK7P50613 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC21.11■□□□□ 0.97
CDK7P50613 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CDK7P50613 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CDK7P50613 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.1■□□□□ 0.97
CDK7P50613 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDK7P50613 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC21.1■□□□□ 0.97
CDK7P50613 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDK7P50613 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDK7P50613 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CDK7P50613 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
CDK7P50613 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC21.1■□□□□ 0.97
CDK7P50613 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CDK7P50613 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDK7P50613 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDK7P50613 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CDK7P50613 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC21.1■□□□□ 0.97
CDK7P50613 AL845331.1-201ENST00000424978 1190 ntBASIC21.1■□□□□ 0.97
CDK7P50613 AP002383.4-201ENST00000442518 975 ntBASIC21.1■□□□□ 0.97
CDK7P50613 KRT17P6-201ENST00000453795 1220 ntBASIC21.1■□□□□ 0.97
CDK7P50613 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC21.1■□□□□ 0.97
CDK7P50613 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC21.1■□□□□ 0.97
CDK7P50613 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC21.1■□□□□ 0.97
CDK7P50613 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC21.1■□□□□ 0.97
CDK7P50613 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC21.1■□□□□ 0.97
CDK7P50613 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CDK7P50613 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CDK7P50613 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDK7P50613 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC21.1■□□□□ 0.97
CDK7P50613 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDK7P50613 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CDK7P50613 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CDK7P50613 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC21.09■□□□□ 0.97
CDK7P50613 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDK7P50613 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.09■□□□□ 0.97
CDK7P50613 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDK7P50613 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC21.09■□□□□ 0.97
CDK7P50613 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDK7P50613 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.09■□□□□ 0.97
CDK7P50613 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
CDK7P50613 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDK7P50613 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDK7P50613 PVRIG2P-201ENST00000435460 978 ntBASIC21.09■□□□□ 0.97
CDK7P50613 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC21.09■□□□□ 0.97
CDK7P50613 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC21.09■□□□□ 0.97
CDK7P50613 AC034232.1-201ENST00000506026 1064 ntBASIC21.09■□□□□ 0.97
CDK7P50613 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC21.09■□□□□ 0.97
CDK7P50613 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CDK7P50613 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC21.09■□□□□ 0.97
CDK7P50613 TBCB-205ENST00000585746 875 ntTSL 3 BASIC21.09■□□□□ 0.97
CDK7P50613 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDK7P50613 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
CDK7P50613 AL121672.3-201ENST00000608644 468 ntBASIC21.09■□□□□ 0.97
CDK7P50613 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDK7P50613 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDK7P50613 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDK7P50613 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC21.09■□□□□ 0.97
CDK7P50613 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
CDK7P50613 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDK7P50613 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
CDK7P50613 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDK7P50613 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC21.09■□□□□ 0.97
CDK7P50613 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDK7P50613 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CDK7P50613 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms