Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC21.86■■□□□ 1.09
TM4SF4P48230 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC21.86■■□□□ 1.09
TM4SF4P48230 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
TM4SF4P48230 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC21.86■■□□□ 1.09
TM4SF4P48230 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC21.86■■□□□ 1.09
TM4SF4P48230 AL773604.1-201ENST00000617417 272 ntBASIC21.86■■□□□ 1.09
TM4SF4P48230 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
TM4SF4P48230 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
TM4SF4P48230 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
TM4SF4P48230 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TM4SF4P48230 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
TM4SF4P48230 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
TM4SF4P48230 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
TM4SF4P48230 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TM4SF4P48230 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TM4SF4P48230 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
TM4SF4P48230 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.85■■□□□ 1.09
TM4SF4P48230 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TM4SF4P48230 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC21.85■■□□□ 1.09
TM4SF4P48230 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC21.85■■□□□ 1.09
TM4SF4P48230 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
TM4SF4P48230 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
TM4SF4P48230 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TM4SF4P48230 LSM5-204ENST00000409909 740 ntTSL 2 BASIC21.85■■□□□ 1.09
TM4SF4P48230 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
TM4SF4P48230 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC21.85■■□□□ 1.09
TM4SF4P48230 AL390719.2-201ENST00000606993 987 ntBASIC21.85■■□□□ 1.09
TM4SF4P48230 TP73-AS1-207ENST00000624167 988 ntBASIC21.85■■□□□ 1.09
TM4SF4P48230 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC21.85■■□□□ 1.09
TM4SF4P48230 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
TM4SF4P48230 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TM4SF4P48230 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TM4SF4P48230 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
TM4SF4P48230 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
TM4SF4P48230 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TM4SF4P48230 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC21.84■■□□□ 1.09
TM4SF4P48230 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
TM4SF4P48230 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC21.84■■□□□ 1.09
TM4SF4P48230 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC21.84■■□□□ 1.09
TM4SF4P48230 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
TM4SF4P48230 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC21.84■■□□□ 1.09
TM4SF4P48230 MOK-208ENST00000519058 917 ntTSL 2 BASIC21.84■■□□□ 1.09
TM4SF4P48230 AC106730.1-201ENST00000566722 1090 ntBASIC21.84■■□□□ 1.09
TM4SF4P48230 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
TM4SF4P48230 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
TM4SF4P48230 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
TM4SF4P48230 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
TM4SF4P48230 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
TM4SF4P48230 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
TM4SF4P48230 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC21.83■■□□□ 1.09
TM4SF4P48230 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
TM4SF4P48230 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
TM4SF4P48230 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC21.83■■□□□ 1.09
TM4SF4P48230 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC21.83■■□□□ 1.09
TM4SF4P48230 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC21.83■■□□□ 1.09
TM4SF4P48230 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC21.83■■□□□ 1.09
TM4SF4P48230 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC21.83■■□□□ 1.09
TM4SF4P48230 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
TM4SF4P48230 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
TM4SF4P48230 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
TM4SF4P48230 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
TM4SF4P48230 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.08
TM4SF4P48230 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
TM4SF4P48230 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
TM4SF4P48230 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC21.83■■□□□ 1.08
TM4SF4P48230 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC21.83■■□□□ 1.08
TM4SF4P48230 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
TM4SF4P48230 AC009237.14-201ENST00000609975 1594 ntBASIC21.82■■□□□ 1.08
TM4SF4P48230 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC21.82■■□□□ 1.08
TM4SF4P48230 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
TM4SF4P48230 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC21.82■■□□□ 1.08
TM4SF4P48230 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.82■■□□□ 1.08
TM4SF4P48230 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TM4SF4P48230 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
TM4SF4P48230 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TM4SF4P48230 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TM4SF4P48230 COX10-202ENST00000429152 875 ntTSL 2 BASIC21.82■■□□□ 1.08
TM4SF4P48230 AP003733.1-201ENST00000491725 852 ntBASIC21.82■■□□□ 1.08
TM4SF4P48230 RNPS1P1-201ENST00000507437 918 ntBASIC21.82■■□□□ 1.08
TM4SF4P48230 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC21.82■■□□□ 1.08
TM4SF4P48230 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC21.82■■□□□ 1.08
TM4SF4P48230 ABR-217ENST00000572441 563 ntTSL 4 BASIC21.82■■□□□ 1.08
TM4SF4P48230 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC21.82■■□□□ 1.08
TM4SF4P48230 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC21.82■■□□□ 1.08
TM4SF4P48230 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
TM4SF4P48230 CCNC-219ENST00000627680 896 ntTSL 5 BASIC21.82■■□□□ 1.08
TM4SF4P48230 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TM4SF4P48230 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
TM4SF4P48230 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.82■■□□□ 1.08
TM4SF4P48230 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TM4SF4P48230 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC21.82■■□□□ 1.08
TM4SF4P48230 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TM4SF4P48230 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC21.82■■□□□ 1.08
TM4SF4P48230 AC104417.2-201ENST00000562989 1793 ntBASIC21.82■■□□□ 1.08
TM4SF4P48230 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TM4SF4P48230 PMS2P7-201ENST00000506558 1336 ntBASIC21.81■■□□□ 1.08
TM4SF4P48230 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TM4SF4P48230 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TM4SF4P48230 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TM4SF4P48230 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms